Acidiphilium cryptum: Acry_3541
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Entry
Acry_3541 CDS
T00527
Name
(GenBank) ATP-dependent DNA helicase, RecD/TraA family
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
acr
Acidiphilium cryptum
Pathway
acr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Acry_3541
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acr03400
]
Acry_3541
Enzymes [BR:
acr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
Acry_3541
DNA repair and recombination proteins [BR:
acr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Acry_3541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
HHH_RecD2
OB_YrrC
UvrD_C_2
SH3_13
HHH_5
Viral_helicase1
AAA_11
HHH_2
AAA_22
Helicase_RecD
nSTAND3
AAA_16
NTPase_1
PIF1
AAA
AAA_29
UvrD-helicase
AAA_5
T2SSE
CbiA
DEAD
MeaB
AAA_23
AAA_28
SLFN-g3_helicase
ABC_tran
NPHP3_N
RsgA_GTPase
HHH
NACHT
TsaE
AAA_26
TrwB_AAD_bind
PhoH
Mg_chelatase
AAA_14
ATP_bind_1
KTI12
Rad17
Motif
Other DBs
NCBI-ProteinID:
ABQ29141
UniProt:
A5FU59
LinkDB
All DBs
Position
pACRY03:complement(73588..75783)
Genome browser
AA seq
731 aa
AA seq
DB search
MGNHFIATAPAQTPDREVLAGLVERVTFHNVENGFCVLRVKARGHRDLVTVIGHAATISA
GEWLTASGEWVNDRVHGQQFRARFLRTSAPTTAEGIERYLASGMIRGIGPVYAKKLIRAF
GETVFDVIEAKPERLREVPGIGAVRAGRIVNAWAEQKVVREIMVFLHSHGVSTARAVRIF
KTYGADAVQVMSENPYRLARDIRGIGFRTADAIAEKLGIARDAMIRVRAGIGHALATAMD
DGHCGLPAGELVSLAETLLEVPAPLIGTALDLELAEGTVIADQVAGTDCVFLAGLYRAEQ
GIAERLRIVASGATPWPSIDADKAIGWVESHLGMNLATSQSEAVRLALTAKLLVITGGPG
VGKTTIVRAILRILAAKSVRILLAAPTGRAAKRLAETTGGEAKTIHRLLEVDPASGSFRR
GVDHPLECDLLVIDETSMVDVPLMHALTRAIPDEAALLVVGDVDQLPSVGPGQVLADLIG
SGAVPVVRLTEIFRQASASRIITVAHSVNRGEIPDLGRADPESDFHFVAADEPETAVERI
VELVKTRIPHRFGLDPIRDIQVLCPMARGGVGARSLNITLQAALNGAAEPRVERFGWTYA
PGDKVMQIENDYDREVYNGDIGFIARVDAEAGEVGVGFDGREVVYGLGELDGLVPAYAAT
IHKSQGSEYPAVVIPVLTQHYVMLQRNLLYTGITRGRRLVVLVGSRRAVAIAVRNVSGRR
RWSKLREWLSG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atggggaaccattttattgccactgcccctgctcagacacccgatcgcgaggtcctcgct
ggcctggttgagcgggtgacgttccacaatgtcgagaacggcttttgcgtgttgcgggtg
aaagcccgggggcaccgtgatctcgttacagtcatcgggcatgccgcgacgatcagcgct
ggcgagtggctgacggcgagcggcgagtgggtgaacgaccgggttcatggccagcaattc
cgggcgcggttcctgcggacatcggcgccgaccacggccgaggggatcgagcgctatctg
gcctcgggcatgatccgcggcatcgggccggtgtatgcgaagaaactgatccgagccttc
ggcgagacggtgttcgacgtgatcgaggcaaagcccgagcgcctgcgcgaggtgccgggt
atcggcgcggtgcgggccgggcggatcgtcaatgcctgggccgagcagaaggtggtgcgg
gagatcatggtgttcctgcacagccatggggtgagcacggcccgcgccgtgcggatcttc
aagacctacggcgccgacgcggtgcaggtgatgagcgagaacccgtatcgtctggcgcgg
gacatcagggggatcggtttccggacagcggatgcgatcgcggagaagcttggcatcgcc
agggacgcgatgatccgtgtgcgtgctggcatcggtcatgcgctggcgacggcaatggat
gatggccattgtggcctaccggccggcgaactggtctcgctcgccgaaacgttgctcgag
gtgccggcgccgctgatcgggacggcactcgacctcgaactggcagagggcacggtgatc
gccgatcaggtggcggggactgactgtgtgttcctggccggcttgtatcgggcggagcag
ggtatcgccgaacggctgcggattgttgcctctggtgcaacgccctggccatcgatcgat
gcggacaaggcgatcggctgggtggaaagccatctcggcatgaatctggcgacgagccag
agtgaggcggtgcggctggcgctgaccgcgaagctgttggtgatcaccggcggaccgggt
gtcggcaagaccacgatcgtccgggcgatcctgcggatcctcgctgcgaaatccgtccgc
attctgctcgccgcgccgaccggccgggcagccaagcgccttgccgagacgacggggggc
gaggcgaagacgatccaccgcctgctcgaggtagatcctgcgagcggtagtttccgccgc
ggcgtcgaccatcctctggaatgcgaccttctggtgatcgacgagacctcgatggtggac
gtgccgttgatgcatgcgctgaccagggcgatccccgacgaggcagcgctgctggtggtg
ggagatgtcgaccagcttccctcggtgggaccggggcaggtgctcgccgatctgatcggg
tctggcgcggtaccggtggtgcggctgacggagatcttccgccaggcatcggcgagccgg
atcatcaccgtggcgcatagcgtcaatcgcggggagatccccgatctcggccgcgccgat
cccgagagcgatttccatttcgtggcggccgacgagccggagacggcggtcgagcgcatc
gtggagctggtgaagacgcggattccgcaccggtttggactggatccgatccgcgacatc
caggtgctctgtccgatggcccggggtggggtcggcgcgcggtcactcaacatcaccctg
caggcggcgctgaacggcgcggcggaaccgcgggtcgagcgattcggctggacctatgct
cccggcgacaaggtcatgcagatcgagaacgactacgaccgggaggtctacaacggcgat
atcggctttattgcccgggtcgatgcggaggccggggaggttggcgtcggcttcgatgga
cgggaggtggtctacggtctcggcgagctggacgggcttgtgccggcctatgcggcgacg
atccacaagtcccagggctcggaataccctgccgtcgtcattccggtgctgacccagcac
tacgtgatgctgcagcggaacctgctctacaccggcatcacgcgcggccggcggctagtc
gttctggtcggcagtcggcgtgctgtcgccatcgccgtgcggaatgtctcggggcggcgc
cgatggtcgaagctcagagagtggctgtcaggatga
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