Acidovorax sp. RAC01: BSY15_2546
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Entry
BSY15_2546 CDS
T04481
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra03030
DNA replication
acra03410
Base excision repair
acra03420
Nucleotide excision repair
acra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY15_2546 (polA)
03410 Base excision repair
BSY15_2546 (polA)
03420 Nucleotide excision repair
BSY15_2546 (polA)
03440 Homologous recombination
BSY15_2546 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acra03032
]
BSY15_2546 (polA)
03400 DNA repair and recombination proteins [BR:
acra03400
]
BSY15_2546 (polA)
Enzymes [BR:
acra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY15_2546 (polA)
DNA replication proteins [BR:
acra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BSY15_2546 (polA)
DNA repair and recombination proteins [BR:
acra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BSY15_2546 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSY15_2546 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
HHH_2
WHD_SSO1393
Motif
Other DBs
NCBI-ProteinID:
AOG23513
LinkDB
All DBs
Position
2833848..2836646
Genome browser
AA seq
932 aa
AA seq
DB search
MTDKKTLVLVDGSSYLYRAFHAMPDLRAVPGDPTSPATGAIRGMINMMQAMRKEVTADYA
VCVFDASGPTFRDALYTEYKATRSPMPDDLRSQIEPIHQVVDLLGWKVVAVPGVEADDVI
ATMAHMAAAQGIEVIVSSGDKDLSQLVNEHITIIDTMSGKRRDVAGVTAEFGVPPTLMVD
YQALVGDTVDNVPGVTKVGPKTAAKWLEEYGSLDNLMANADAIKGVAGNNLREAIASGQL
ALSRQLVTMKTDCALSDYIPGLPAFDDITLDAPDNAGLLPFYEKYGFKGLASAIKGAAAP
AATAPTVAMPGQSGDLFADHSASTVAEEVQHRTVVYDTILNWADFDQWLERLHKAPLAAI
DTETDSLDEMRAQIVGISFSVQPGEAAYIPLRHEGPDAPAQLPLDEVLARLKPWLEDPKH
LKLGQHIKYDRHVFANHGIEVQGYAHDTMLQSYVLEVHKPHNLTSLAERHTGRKGITYED
LCGKGAHQIPFAQVPVDKAAAYSCEDSDQTLDVHNALWPLLQVDDKLRFIYELEIASSEA
LYRIERNGVLIDAPTLAAQSHELGQRILQLETEAYEIAGQPFNLSSPKQLGEIFFDKLGM
PVVKKTATGARSTDEEVLEKLAEDYPLPAKLLEHRSLVKLKGTYTDKLAQLALPRTGRVH
THYAQAVAVTGRLSSNDPNLQNIPIRTPEGRRVREAFVAPAGRVIASADYSQIELRIMAH
LSGDHSLLHAFHAGLDVHRATAAEVFGVEVDQVTSEQRRYAKVINFGLIYGMSSFGLAKN
LGIETKAAAAYIDKYFQRYPGVKQYMDDTKAAAKSMGYVETVFGRRLYLPEINSPNGPRR
AGAERAAINAPMQGTAADLIKLAMVAVQKELDAHKPDIQMIMQVHDELVFELPEGEVDWL
KAHIPRLMAEVAALKVPLLAEVGVGANWDKAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaaagaccctggtgctggtggacggctccagctacctctaccgcgccttc
catgccatgcccgacctgcgggccgtgccgggcgaccccaccagcccagccacgggtgcc
attcgcggcatgatcaacatgatgcaggccatgcgcaaagaggtgaccgccgactacgcc
gtctgcgtgttcgacgccagcggccccaccttccgcgatgccctgtacaccgaatacaag
gccacgcgctcgcccatgcccgacgacctgcgcagccagatcgagcccatccaccaggtg
gtggacctgctgggctggaaggtggtggccgtgcccggcgtagaggccgacgacgtcatc
gccaccatggcccacatggcggccgcacagggcatcgaggtcatcgtgtccagcggcgac
aaggatttgagccagctggtcaacgagcacatcaccatcattgacaccatgagcggcaag
cgccgcgatgtggcaggcgtgacggcagagtttggcgtgccacccacgctgatggtggac
taccaggcgctggtgggcgacaccgtggacaatgtgcccggcgtgaccaaggtgggcccc
aagacggccgccaagtggctggaagaatatggctcgctcgacaacctgatggccaacgcc
gacgccatcaagggcgtggcgggcaacaacctgcgcgaagccattgccagcggccagctg
gccctgagccgtcagctcgtcaccatgaagactgactgcgcgctgtccgactacatcccc
ggcctgcccgcgtttgacgacatcacgctggacgcgccagacaacgctggcctgctgccg
ttttacgaaaaatacggcttcaagggcctggccagtgccatcaagggtgctgcggccccc
gccgctacagcccccaccgtcgccatgcccggccaaagcggtgatctgtttgccgaccac
tccgccagcaccgtggccgaagaagtccagcaccgcacggtggtgtacgacaccatcctc
aactgggccgactttgaccagtggctggagcgactgcacaaggccccgctggcggcgatc
gacaccgagaccgattcgctggacgaaatgcgcgcgcaaatcgtcggcatcagcttcagc
gtgcagcccggcgaggccgcctacatccccttgcgccacgaaggccccgatgcccccgcg
caactgccgttggatgaagtgctcgcccgcctcaagccctggctggaggaccccaagcac
ctcaagctgggccagcacatcaagtacgaccgccatgtgttcgccaaccacggcatcgaa
gtgcagggctacgcgcacgacaccatgctgcaaagctacgtgctcgaagtgcacaagccc
cacaacctgaccagcctggccgagcgccacaccggccgcaaaggcatcacctacgaagac
ctgtgtggcaaaggcgcgcaccagatcccgtttgcgcaagtgccggtggacaaggccgcc
gcctactcgtgcgaagactccgaccagacgctggacgtgcacaacgccctgtggccgctg
ctgcaggtggatgacaagctgcgcttcatctacgagctggagattgcgagcagcgaggcc
ctgtaccgcatcgaacgcaacggcgtgctgattgacgcacccacgctggccgcccaaagc
cacgagctgggccagcgcatcctgcagcttgaaaccgaggcgtacgagattgcaggccag
cccttcaacctgagcagccccaagcagctgggcgaaatcttcttcgacaagctgggcatg
ccggttgtgaagaagaccgccactggcgcccgcagcaccgacgaagaagtgctggaaaaa
ctggccgaggactaccccctgcccgccaagctgctggagcaccgcagcctggtcaagctc
aaaggcacctacaccgacaagctggcacagctggccctgccgcgcaccggccgcgttcac
acccactacgcgcaggctgttgccgtcacgggccgcttgtccagcaacgaccccaacctg
cagaacatccccatccgcacccccgaaggccgccgcgtgcgcgaggctttcgtcgccccc
gcaggccgcgtgattgccagcgccgactactcccagatcgagctgcgcatcatggcccac
ctcagcggcgaccactcgctgctgcacgccttccacgccgggctggacgtgcaccgcgcc
accgctgccgaagtgtttggggtggaagtggaccaggtcaccagcgagcaacgccgctac
gccaaggtcatcaactttggcctgatctacggcatgagcagctttggcctggccaagaac
ttaggcatcgagaccaaggccgctgccgcctatatcgacaaatacttccagcgctacccc
ggcgtgaagcagtacatggacgacaccaaggccgccgccaaatccatgggctatgtcgaa
accgtgtttggccgccgcctgtacctgcccgaaatcaactcccccaacggcccccgccgc
gccggggccgagcgcgccgccatcaacgcgcccatgcagggcacggcagccgacctcatc
aagctggccatggtggccgtgcaaaaagagctggacgcccacaagccagacatccaaatg
atcatgcaggtgcacgacgaactggtgttcgaactgcccgagggcgaggtggactggctc
aaggcccacatcccgcgcctgatggcagaggtggcggcgctgaaggtgccgttactggcg
gaagtgggggtgggggctaattgggataaggcgcattga
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