Acidovorax sp. RAC01: BSY15_3332
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Entry
BSY15_3332 CDS
T04481
Symbol
dnaE
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra03030
DNA replication
acra03430
Mismatch repair
acra03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BSY15_3332 (dnaE)
03430 Mismatch repair
BSY15_3332 (dnaE)
03440 Homologous recombination
BSY15_3332 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acra03032
]
BSY15_3332 (dnaE)
03400 DNA repair and recombination proteins [BR:
acra03400
]
BSY15_3332 (dnaE)
Enzymes [BR:
acra01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BSY15_3332 (dnaE)
DNA replication proteins [BR:
acra03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BSY15_3332 (dnaE)
DNA repair and recombination proteins [BR:
acra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BSY15_3332 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
AOG23657
LinkDB
All DBs
Position
3716402..3719935
Genome browser
AA seq
1177 aa
AA seq
DB search
MFVHLRLHTEFSVVDGTNRIDEVAKAAARDGQPALAITDLNNLFGAIKFYKETRGKGVKP
ILGAEIFVEGEAGAAPARFIVLVQSRQGYLNLSELLARAWTRNIVKNVAVCTWAWIEELG
EGLIALAGAQAGPVGQALLKGDDQGAADVALRMAGIFPHRFYIELQRAGRVDDESHVIAA
AQLAARLNLPVVATHPVQFATADDYEAHEARVCIAEGEILANPRRVRKFTRDQYFKSASE
MEALFADVPSAIANTVEIAQRCNLTLVLGKPQLPDFPTPNGMPIDEYFRVASFEGLEERL
ALLFPKPAERDAQRPRYVERLEFEIGTILKMGFPGYFLIVGDFIQWAKNNGCPVGPGRGS
GAGSLVAYALKITDLDPLQYNLLFERFLNPERVSMPDFDIDFCQSNRDRVIDYVKDKYGK
NAVSQIATFGTMAAKAAIRDVGRVMDMSYTFCDGISKLVPGKPGMSYTLAYPPAVKKDGD
KNNYALELEPLLAERVQKEEDVKTIIEMAQKLEGMTRNIGMHAGGVLIAPGKLTDFCPLY
QQPGSESAVSQYDKDDVEAIGLVKFDFLGLATLTILEIAREFIMKRHKGQENFTFEAIPL
DDGPTYRLFSEGKTEAVFQFESRGMQGMLKEARPSRLEDLIALNALYRPGPMDLIPSFVN
RKHGKEVVEYPHPLVEKVLSETYGIMVYQEQVMQTAQVLGGYSLGGADMLRRAMGKKKAE
EMAEHREIFRAGAAKQGISQEKADEVFDLMEKFAGYGFNKSHAAAYSLLAYHTGWLKVHF
TAEFFCANMTVEMDDTDKLKVLFEDAHKMGLSFEPPDVNRGFYRFEPVTDKIIRYGLGAV
KGTGQQAIEAIVAAREGRGDGPQGSTKGPFKSLFDFCLRVDRARLNKRTVEALIKAGAFD
SLNMNRASMVASIDRAFDFAAATLANVNQGGLFDMMGDDAHGSSTQEPDLVEAVPWGIKE
RLTQEKTAVGFYLSGHLFDEVATEVRRFVRTSIDELLDSREPQILAGIVSDFRVINGQRG
KLALFKLDDKSGVIEASADEALLNTYRNQLKEDEFVVMLGRLQLDHFSGGLRLKVQQVWD
LAGARCRFGKYLHVVVGDRGPDLQRLVREFPPRREEIAEGELLHGLKVRMGVRCKADGGA
ATAELQLGDSAKFYPTDAALAAWTAQAGTGSATVVYE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcacttgcgcctgcacaccgagttttccgtcgttgacggcaccaaccgtatc
gatgaggtggccaaggccgccgcccgggatggacagcccgcgctggccatcaccgatctc
aacaaccttttcggcgccatcaagttctacaaggagacgcgcggcaagggcgtcaagccc
attctgggggcggagatttttgtggagggcgaggcgggcgctgcgcctgcccgcttcatc
gtgctggtgcaaagccgccagggctacctgaacctgtctgaattgctggcacgcgcctgg
acgcgcaacatcgtcaagaacgtggcggtgtgcacctgggcgtggatcgaggaactgggc
gaaggcctcatcgccctggccggcgcgcaggccgggccggtagggcaggcgctgctcaag
ggagacgaccagggcgccgccgacgtggcattgcgcatggccgggatatttcctcaccgc
ttttacatcgagctgcagcgtgcgggccgtgtggatgacgaaagccacgtcatcgcggcg
gcccagctggcagcccgcctgaacctgcctgtggtggccacgcacccggtgcagtttgcg
accgctgacgactacgaagcgcatgaggcccgggtctgcatcgccgagggcgagatcctg
gccaaccctcgccgcgtgcgcaagttcacgcgcgaccagtatttcaaatcagcctccgag
atggaggcgctctttgccgacgtgccgtctgcgatcgcaaacaccgttgagattgcccag
cgctgcaacctgacgctggtgctgggcaagccacagttgccagacttcccgacgcccaac
ggcatgcctattgatgagtattttcgggtggcatcgttcgagggactggaagagcgcctt
gcgctgctttttccaaaacctgcggagcgcgatgcccagcggccccgttacgtggagcgc
ctggagttcgagattggcaccatcctgaagatggggtttccgggctacttcctcatcgtg
ggcgatttcatccagtgggccaagaacaacggctgccccgtggggcccggccgggggtcc
ggtgcaggctcgctggtggcctatgcgctcaagatcaccgacctggacccgctgcagtac
aacctgctgttcgagcgtttcctgaaccccgagcgcgtgtcgatgcccgacttcgacatc
gatttctgccagtccaaccgcgaccgggtgatcgactacgtgaaagacaagtacggcaag
aacgccgtgagccagatcgccaccttcggcaccatggctgccaaggcggccatccgtgat
gtgggacgcgtcatggacatgagctatacgttttgcgacggcatctccaaactggtgccc
ggcaagcccggtatgtcatacacgctggcgtacccgcctgccgtcaagaaggacggcgac
aagaacaactacgcgctggagctggagcctctgctggccgaacgcgtacagaaggaagaa
gacgtcaagaccatcatcgagatggcgcaaaagctcgagggcatgacgcgcaacatcggc
atgcacgctggcggggtgctgattgctccgggcaagctcaccgatttttgcccgctgtac
cagcagccgggcagcgaatcggctgtgagccaatacgacaaggatgacgtggaggccatc
ggcctggtgaagttcgactttctggggctggccacgctgaccatcctggagatcgcgcgc
gaattcatcatgaagcgccacaaggggcaggagaacttcacgttcgaggcgattccgctg
gacgacggccctacctaccgcctgttttccgagggcaagaccgaggcagtgttccagttt
gaaagccgcggcatgcagggcatgctcaaggaagcgcggcccagccggctggaagacctg
attgcgctgaatgcgttgtaccggcctggccccatggacctgatccccagcttcgtgaac
cgcaagcatggcaaggaggtggtcgagtacccgcacccgctggtcgagaaggtgctgtcg
gaaacctacgggatcatggtctaccaggagcaggtgatgcagaccgcccaggtgctgggc
ggctacagcctgggcggcgccgacatgctgcgccgggcgatgggcaagaaaaaggccgag
gagatggccgagcaccgcgagattttccgcgccggtgcggccaagcagggtatcagtcag
gagaaggcggacgaggtcttcgacctgatggagaagttcgcaggctacggcttcaacaag
tcgcacgccgctgcgtactcgctgctcgcataccacaccggctggctcaaggtccacttc
acggccgagttcttctgcgccaacatgacggtggaaatggacgacaccgacaagctcaag
gtgctgttcgaagacgcgcacaagatggggttgtcgttcgagccgccggacgtgaaccgc
gggttctaccgtttcgagcccgtcaccgacaagatcatccgctacggcctgggtgccgtc
aaaggcacgggccagcaggccatcgaagccatcgtggccgcccgggaagggcggggtgac
ggcccgcaaggttccaccaaggggccattcaaaagcttgtttgacttctgtttgcgggtg
gacagggcccgactgaacaagcgcacggtcgaggcgctcatcaaggcaggcgcattcgat
tcgctgaacatgaaccgcgcctcgatggtggcatccatcgaccgtgcttttgactttgcg
gccgccacgctggccaacgtgaaccagggcgggctgtttgacatgatgggtgacgatgcc
cacggctcgagcactcaggaacccgatctggtcgaggccgttccgtggggcatcaaggag
cggctcacgcaggaaaagacggccgtgggcttttacctgtcgggccacctgtttgacgag
gttgctacggaggtgcggcggttcgtccgcacttccatcgatgagctgctcgacagccgt
gagccccagatccttgcgggcatcgtcagcgactttcgcgtcatcaacgggcagcgtggc
aagctggcgctgttcaagctggacgacaagtcgggcgtgatcgaggcctcggccgacgag
gcgctgctcaacacctatcgcaaccagctcaaggaagacgagttcgtggtcatgctgggc
cggctgcagctcgatcatttcagcggcgggctcaggctgaaggtgcagcaggtgtgggac
ctggcgggcgcccgctgccgtttcggcaaatacctgcatgtggtggtgggcgaccgtggc
ccggatttacagcgcttggtgcgcgagtttccgccccggcgcgaggaaatcgccgaaggc
gagctgctacacggcctgaaggtgcggatgggggtgcgctgcaaggcggatggcggggct
gccacagccgagttgcagctgggcgacagcgccaagttctaccctaccgatgccgcactg
gccgcctggacggcccaggcgggtacgggctctgccacggtggtctacgagtaa
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