Acidovorax sp. RAC01: BSY15_3593
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Entry
BSY15_3593 CDS
T04481
Name
(GenBank) hhH-GPD superbase excision DNA repair family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BSY15_3593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acra03000
]
BSY15_3593
03400 DNA repair and recombination proteins [BR:
acra03400
]
BSY15_3593
Enzymes [BR:
acra01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
BSY15_3593
Transcription factors [BR:
acra03000
]
Prokaryotic type
Helix-turn-helix
AraC family
BSY15_3593
DNA repair and recombination proteins [BR:
acra03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BSY15_3593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
HhH-GPD
HTH_23
RecR_HhH
HTH_Tnp_ISL3
HHH
HTH_Tnp_1
Motif
Other DBs
NCBI-ProteinID:
AOG22838
UniProt:
A0A1B3PJ83
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Position
4006367..4008004
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AA seq
545 aa
AA seq
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MIGSMTLPTRPPALRPTPGTVGPAAATAADAGIAADEGRYLALQARDARFDGRFFTGVTS
TGIYCRPVCAVRTPRRENCRFFTLAAQAESAGFRPCLRCRPEVAPQAMAWSVQDATGILV
QQAVRLLDAPDFAAAHDVQGATVARLAQRLGVSDRHLRRIFEAALGVSPLQYLQTRRLLT
AKQLLTDTPMPVTQVALASGFGSVRRFNAAFSTHYGLNPTQLRRGAAPLQAGAHRSAASA
TLRLAWRPPMDVPALLAFFERRRFVGVEAVLTDATAPTLRRTVRLPGGITGWLSAQFDTT
RHLVLLNTSESLYPALPEVIRRVRAMLDLDADPAAINAVLGPVFPGCDGLRVPGAFDGFE
LAVRAVLGQQITVAAARTLGQRLVEHLGEPVATPWSDLNRLFPTPAVLASASGDTLGRLG
IVRQRQAAIVALARAVDSGALALNALADVPATLAALCALPGIGDWTAQYIAMRVLRWPDA
FPAGDVALHKALGVQGERNPARAALQASEAWRPWRSYGVVRAWTALAAGGTARSPAPAAV
DHQNQ
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgatcggctccatgacattgcccacacgcccccccgccctgcggcccaccccgggcacc
gtgggcccggctgcggccaccgcggcggatgcgggcattgccgccgacgaaggccgttac
ctggcgctgcaggcgcgcgatgcgcgctttgacgggaggttttttaccggggtgacgtcc
acgggcatctactgccggccggtgtgcgccgtgcgcacgccgcggcgtgagaactgccgc
tttttcaccctggcggcccaggccgagagcgcggggttccggccctgcctgcgctgtcgg
cccgaagtggcgccgcaggcgatggcatggtcggtgcaggacgccaccggcatcctggtg
cagcaggccgtgcgcctgctggatgcaccggacttcgcggcggcccatgacgtgcagggc
gccacggtggcgcggctggcccagcgcctgggcgtgagcgaccggcacctgcgccgcatt
ttcgaggcggcgctcggggtctcgcccttgcaatacctccagacacggcggctgctcacg
gccaaacaactgctgaccgacacgcccatgccagtcacgcaggtggcgctggccagcggc
tttggcagcgtgcgccgcttcaacgccgcgttttcaacgcactacgggctcaaccccacc
cagctgcgccgtggcgcggcgccgctgcaggccggcgcccaccggagtgcagccagcgca
accctgcggctggcctggcgcccgcccatggatgtaccggccctgctggcgtttttcgag
cgcaggcgtttcgtcggggtcgaggccgtgctgaccgatgccacggcgcccaccctgcgc
cgcacggtacggctgccgggcggcatcaccggctggctcagtgcgcagttcgacaccaca
cgccacctggtgctgctgaacaccagcgaaagcctgtaccccgcattgcccgaggtgatc
cgccgcgtgcgcgccatgctcgacctggacgcagacccggccgccatcaacgccgtgctg
ggcccggtgttccccggttgcgacgggctcagggtgccgggcgcgttcgacgggttcgag
ctggccgtgcgggccgtgctgggccagcagatcaccgtggcagccgcgcgcacgctgggc
cagcgcctggtggagcacctgggcgagccagtggccacaccgtggtccgacctgaaccgg
ctcttccccacgcccgccgtgctggccagcgccagcggcgacaccctggggcggctgggc
atcgtgcgccagcgccaggcggccatcgtggcgctggcccgcgcggtagacagcggggcg
ctggccctcaatgcccttgccgatgtgcccgccaccctggccgccctctgcgccctgccc
ggcattggcgactggaccgcccagtacatcgccatgcgcgtgctgcgatggcccgatgcg
tttccagcgggtgacgtggccctgcacaaggcgctgggtgtgcagggcgagcgcaacccc
gcgcgcgccgccctgcaggcgtcggaagcctggcgtccttggcgcagctacggggtggtc
cgggcctggaccgcactggcggcggggggcaccgcacggtcccccgcgcctgcggccgtc
gatcatcaaaatcaatag
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