Acidovorax sp. RAC01: BSY15_499
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Entry
BSY15_499 CDS
T04481
Name
(GenBank) DEAD/DEAH box helicase family protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acra
Acidovorax sp. RAC01
Pathway
acra03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acra00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BSY15_499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acra03019
]
BSY15_499
Enzymes [BR:
acra01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BSY15_499
Messenger RNA biogenesis [BR:
acra03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BSY15_499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
AOG22142
UniProt:
A0A1B3PHA1
LinkDB
All DBs
Position
complement(542232..543734)
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AA seq
500 aa
AA seq
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MTSSFSNLSLAEPLARAVAEMGYESMTPIQAQAIPVVLTGQDVMGAAQTGTGKTAAFSLP
LLQRLLKHESSSTSPARHPVRALVLLPTRELADQVAQQIALYAKYTKLRSTVVFGGMDMK
PQTIELKKGVEVLVATPGRLLDHIEAKNAVLNQVEYVVLDEADRMLDIGFLPDLQRILSY
LPKQRTTLLFSATFSPEIKRLAGSYLQNPITIEVARPNETASTVEQRFYSANDDDKRRAI
HQVLKTRGLKQAFIFVNSKLGCARLARSLEREGLKTAALHGDKSQDERLKALEAFKSGEV
DLLVCTDVAARGLDIKDVPAVFNFDVPFNAEDYVHRIGRTGRAGASGLAVTLVSGSDARL
VADIEKLIKKKIDLEAIEYEEDQPNIRNQGRINDGRRAWREAGETGDGRDAIAPAPRRER
DHRGGREAREPREQHRGFRPAVASRDPFFEKPYEASVAPDAAPAWEAAKTAPRSSVSANI
KPKRKVAALFKATQPEVSTQ
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttccttttccaatttatcgctggctgaaccgctggcgcgcgccgtagccgaa
atgggttacgagtccatgacgcccatccaggcgcaggccattccggtggtgctcaccggg
caagacgtgatgggcgcagcccagacgggcaccggcaagaccgcagcgttttcgctgccg
ctgctgcaacgtctgctcaagcacgagagcagctccacatcccccgcccgccacccggtg
cgcgccttggtgctgttgcccacgcgggaactggccgaccaggtcgcccagcagattgcg
ctgtacgccaagtacaccaagctgcgcagcaccgtggtgtttggcggcatggacatgaag
ccccagaccatcgagctgaaaaaaggtgtcgaggtgctggtggccacgccgggccgcctg
ctggaccacatcgaggccaagaacgcggtgctcaaccaggtcgagtatgtggtgcttgac
gaggcagaccgcatgctggacatcggcttcctgcccgacctgcagcgcatcctgagttac
ctgcccaagcagcgcaccacgctgctgttcagcgccacgttctcgcccgagatcaagcgt
ctggccggcagctacctgcaaaaccccatcaccatcgaagtggcccgcccgaacgagacg
gcctccaccgtggagcaacgtttctacagcgccaacgacgacgacaagcgccgcgccatc
caccaggtgctcaagacccgcgggctcaagcaggcgttcatttttgtgaacagcaagctc
ggctgtgcgcgcctggcccgcagcctggagcgcgaaggcctcaagactgcagccctgcac
ggcgacaagagccaggacgagcgcctgaaggccctggaagcgttcaagagcggcgaagtc
gacctgctggtgtgtaccgatgtggccgcgcgcggcctggacatcaaggacgtgccggcg
gtgttcaacttcgacgtgccgttcaacgccgaagactacgtgcaccgcattggccgtacg
ggccgcgcgggcgcgtcgggcctggccgtcacactggtgtcgggcagcgatgcccggctg
gtggctgacatcgagaagctgatcaagaagaagatcgacctcgaagccatcgaatacgag
gaagaccagccgaacatccgcaatcaaggccgcatcaacgacggccgccgtgcctggcgt
gaagcgggcgaaacgggcgatggccgcgacgccatcgcaccagcgccgcgccgcgagcgc
gaccaccgcggtggccgtgaagcccgcgagccgcgcgagcagcaccgtggctttcgcccg
gccgtggcttcgcgcgacccgttctttgaaaagccctatgaagccagcgtggcgccggat
gcagcgcctgcctgggaagcggccaagacggctccgcgcagcagcgtgtcggccaacatc
aagcccaagcgcaaggtggccgcactgttcaaggccacccagcccgaggtttccacgcag
taa
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