Aliarcobacter cryaerophilus: ACRYA_0721
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Entry
ACRYA_0721 CDS
T06825
Name
(GenBank) DEAD-box ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
acre
Aliarcobacter cryaerophilus
Pathway
acre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRYA_0721
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acre03019
]
ACRYA_0721
Enzymes [BR:
acre01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACRYA_0721
Messenger RNA biogenesis [BR:
acre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACRYA_0721
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
P-loop_SecA
UvrD-helicase
ParG
Motif
Other DBs
NCBI-ProteinID:
AYJ79860
UniProt:
A0AAD0TVK3
LinkDB
All DBs
Position
714824..716200
Genome browser
AA seq
458 aa
AA seq
DB search
MSFLNLGLCAQILRAVKEEGYTTATPIQTESIPVILAKKDVLAAAQTGTGKTAGFTLPLL
ELLNKNYSKDKKIVVKALILTPTRELATQVGQSVEVYGKYLPFKSAVIFGGVGINPQKAI
LKKGVDIITATPGRLLDLVSQDCLDLSKVEFLVLDEADRMLDMGFIHDIKKILSILPKQR
QNLLFSATFSPEIKKLADGLLNSPTLIEASKANSTSHKVEQTVHHVDKERKKELLIHLLN
KNSWRQVLVFTRTKHGANKLSEALIKDKITSAAIHGNKSQGARTKALDDFKAGSVRVLVA
TDIAARGIDIDQLPHVINFELPNVPEDYVHRIGRTGRAGNSGDAISLVCIDEHDYLFGIE
KLIKQKINKIAIEGFKVNPNIKAEPISNGRNRATQSRASKTEDKTSSSKRTFGKKRDEEK
SPSSVKPRGNSNRFGSKRGETSSSNSRNRRVSSSLKSK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttttaaatttaggattatgtgcacaaattcttcgtgcagtaaaagaagagggc
tatacaacagcaactcctattcaaacagagtctattcctgttatattagcaaaaaaagat
gttttagcggctgctcaaacaggaactggaaaaacagcaggttttacacttccattattg
gaattattaaataaaaactattcaaaagataaaaaaattgttgtaaaagcacttatttta
acaccaacaagagagttagcaactcaagtaggacaaagtgttgaagtttatggaaaatat
cttccatttaaatcagctgttatttttggaggagttggaataaatcctcaaaaagcaatt
ttgaaaaaaggtgttgatattattacagcaactcctggaagattgcttgatttggtttct
caagattgtttagatttatcaaaagtagagtttttggttttagatgaagctgatagaatg
cttgatatgggatttattcatgatattaaaaagatattatcaattttgccaaaacaaaga
caaaatttacttttttcagctactttttcaccagagattaaaaaattagcagatggttta
ctaaattctccaactttaatagaggcttcaaaagcaaatagtacttcacataaagttgaa
caaactgttcatcatgttgataaagagagaaaaaaagagcttttaattcatcttttgaat
aaaaatagctggagacaagttttagtatttacaagaacaaaacatggtgcaaataaacta
agtgaagctttaataaaagataaaataacttcagctgcaattcatggaaataaatctcaa
ggtgcgagaacaaaagctttggatgattttaaagctggaagcgtaagagttttggtagca
actgatatagctgcaaggggaattgatatagaccaacttcctcatgtaataaattttgag
ttaccaaatgttcctgaagattatgttcatagaattggtagaactggacgagctggaaat
agtggagatgctatatctttggtttgtattgatgagcatgattatttgtttggaattgag
aaattaattaaacaaaaaataaataaaatagcaatcgaaggctttaaagtaaatccaaat
ataaaagcagaacctatttcaaatggtagaaacagagcaacacaaagtagagcttctaaa
acagaagataaaacttctagctcaaaaagaacttttggtaagaaaagagatgaagaaaaa
tcaccatcaagtgtaaaaccaagaggaaatagcaatagatttggctcaaaaagaggtgaa
acttcatctagtaactcaagaaacagaagagtaagctcaagtttaaaaagtaaataa
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