Aliarcobacter cryaerophilus: ACRYA_1680
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Entry
ACRYA_1680 CDS
T06825
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
acre
Aliarcobacter cryaerophilus
Pathway
acre03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acre00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACRYA_1680 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acre03021
]
ACRYA_1680 (rho)
03019 Messenger RNA biogenesis [BR:
acre03019
]
ACRYA_1680 (rho)
Transcription machinery [BR:
acre03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
ACRYA_1680 (rho)
Messenger RNA biogenesis [BR:
acre03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACRYA_1680 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
AAA_25
S1CSD-TOTE-2
ATPase_2
Spore_III_AA
AAA
AAA_22
OB_RNB
Motif
Other DBs
NCBI-ProteinID:
AYJ80781
UniProt:
A0AAD0TUG7
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All DBs
Position
1665972..1667294
Genome browser
AA seq
440 aa
AA seq
DB search
MEESKEDLKSKNSKKTRTHIPVDGYKIEQLRELPIETLIDIANDLDVENPQELKRQDLMF
MILASQIDAGGFILFTGILEIKDGGFGFLRAIDGNFSDTSNDSYVSATQIKKFALRTGDI
VTGQVRPPNKDSEKYNALLKIEAINYLPVKDSKNRPLFDNLTPLYSTTKFKFEFDSQKLT
GRVLDLFAPMGKGQRSLIVAPPKTGKTELLKELAHAISKNHPEVTLMVLLIDERPEEVTD
MQRSVKGEVYSSTFDLPAHNHVRVAEIVIEKAKRLVEMKKDVVILLDSITRLARAYNTVT
PSSGKVLSGGVDANALHKPKRFFGAARNIEEGGSLTIISTALIDTGSKMDEVIFEEFKGT
GNSEVVLSRNASNKRVYPAIDIVKSGTRKEELLLTPDILQKTWILRNAMSEMDEVDVLKF
LYPKMQKTKNNDDFFASMNE
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atggaagagtcaaaagaagatttaaaatcaaaaaatagtaaaaaaacaagaactcatata
ccagtagatggatataaaattgagcagctaagagaacttccaattgaaactctaatcgat
atagcaaatgatttagatgttgaaaacccacaagaattaaaaaggcaagatttaatgttt
atgatacttgcttctcaaatagatgcaggtggttttatactctttactggtattttagaa
ataaaagacggtggatttggttttttaagagcaattgatggaaacttttctgatacttca
aatgactcatacgtaagtgccacacaaattaaaaaatttgcactaagaactggagatatt
gtaacaggacaagtaagacccccaaacaaagatagcgaaaaatataatgctttacttaaa
atagaagctataaattatctacctgtaaaagattcaaaaaatagaccactttttgacaac
ttaactccactatactctacaacaaaatttaaatttgagtttgatagtcaaaaattaaca
ggtcgtgtacttgacttatttgctcctatgggaaaaggtcaaagaagcttaatagtagca
cctccaaaaactggtaaaacagaacttttaaaagaactagctcatgcaattagcaaaaat
caccccgaagttactttgatggttttattgattgatgaaagacctgaagaggttacagat
atgcaaagaagcgttaaaggagaagtttatagttctacttttgacttgccagctcataat
catgtaagagttgcagaaattgttattgaaaaagcaaaaagacttgtagaaatgaaaaaa
gatgttgtaatacttcttgattcaattacaagattagcaagagcttacaatacagtaaca
ccatcttctggaaaggttctttcaggtggagttgatgcaaatgctttacataaaccaaaa
agattttttggagcagctagaaatattgaagagggtggaagtcttacaattatatcaaca
gctttaattgatactggttcaaaaatggatgaagttatttttgaagagtttaaaggtact
ggaaactctgaagtagttcttagtagaaatgcatcaaataaaagagtttatcctgctatt
gatattgtaaaatcaggtacaagaaaagaagagctacttttaactcctgatattttacaa
aaaacttggattttaagaaatgctatgagtgaaatggatgaagttgatgttttaaaattc
ttatatccaaaaatgcaaaaaacaaaaaacaatgatgatttttttgcttcaatgaacgaa
taa
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