Aliiroseovarius crassostreae: K3J57_01410
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Entry
K3J57_01410 CDS
T08444
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acro
Aliiroseovarius crassostreae
Pathway
acro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
K3J57_01410
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acro03021
]
K3J57_01410
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_01410
Enzymes [BR:
acro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
K3J57_01410
Transcription machinery [BR:
acro03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
K3J57_01410
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
K3J57_01410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Glyco_hydro_65C
Motif
Other DBs
NCBI-ProteinID:
UWP89399
LinkDB
All DBs
Position
290709..291725
Genome browser
AA seq
338 aa
AA seq
DB search
MIHKNWAELIKPTQLDVKPGNDPARQATVVAEPLERGFGLTLGNALRRVLMSSLQGAAIT
SVQIDNVLHEFSSIAGVREDVTDVILNLKGVALSMEVEGPKRLSISAKGPMVVTAGDISE
SAGIEVLNKDHVICHLDDGADLFMELTVNTGKGYVAADKNKPEDAPIGLIPVDAIYSPVK
KVSYDVQPTREGQVLDYDKLTLKLETDGSVTPDDAVAFAARILQDQLSIFVNFDEPEAAG
RQDEDDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNFGRKS
LNEIKEVLSGMGLHLGMDVEEWPPENIEELAKKFEDQF
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgatccataagaattgggcagaactgatcaagccgacccagctggacgtgaagccgggc
aatgaccctgcacgtcaagccaccgttgtggcagaaccgctggagcgtggctttggtctg
accctgggcaacgcgctgcgccgcgttctgatgtcgtcgctgcaaggtgccgccatcact
tcggttcagatcgacaacgttctgcatgagttcagctcgatcgccggtgtgcgtgaagac
gtgaccgacgtgatcctgaacctcaaaggtgtggccctgtcgatggaagtggaaggcccg
aagcgcctgtcgatttccgccaaaggcccgatggttgtgaccgctggtgacatctcggaa
tcggctggcatcgaagtcctgaacaaggaccacgtgatctgtcacctcgacgatggcgct
gacctgttcatggaactgaccgtcaacaccggcaaaggctatgtcgctgccgacaagaac
aagccggaagacgcgccgattggcctcattccggttgatgcgatttattcgccggtcaag
aaagtgtcttacgacgtgcagccgacccgtgaaggtcaggttctcgactatgacaaactg
accctgaaactggaaaccgacgggtccgtgaccccggatgacgccgtggccttcgctgcc
cgcatcctgcaggaccagctgtcgatcttcgtgaacttcgacgagccggaagccgctggt
cgccaggacgaagatgatggccttgagttcaacccgcttctcctgaagaaagtggacgag
ctggaactgtcggtgcgttcggcaaactgcctgaagaacgacaacatcgtttacattggc
gatctgatccagaaaaccgaagccgagatgctgcgcaccccgaactttggccgcaagtcg
ctgaacgaaatcaaagaagtgctttcgggcatgggcctgcacctcggcatggatgtcgaa
gaatggccgcctgagaacatcgaagagctggcgaagaaattcgaagaccagttctga
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