Aliiroseovarius crassostreae: K3J57_03125
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Entry
K3J57_03125 CDS
T08444
Symbol
rimK
Name
(GenBank) 30S ribosomal protein S6--L-glutamate ligase
KO
K05844
ribosomal protein S6--L-glutamate ligase [EC:6.3.2.-]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acro03009
]
K3J57_03125 (rimK)
Ribosome biogenesis [BR:
acro03009
]
Prokaryotic type
ribosomal protein modification factors
K3J57_03125 (rimK)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RimK
Rimk_N
Zn_protease
GSH-S_ATP
ATPgrasp_ST
ATP-grasp_3
GARS_A
LysX_preATP_grasp
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
UWP89701
LinkDB
All DBs
Position
645246..646628
Genome browser
AA seq
460 aa
AA seq
DB search
MTRFSVGWEEWLALPELGLPAVKAKVDTGAKTSALHAFAIEPFGPADRPMVRFAIHPDPD
DAALEIICSAPLKDRREVTSSNGETELRFVIETVISMGEHSWPIEVTLTDRGAMAYRMLL
GRTALTGDVQVMPALSFQQPVLSFDAYRSFPRSNWTKRALRLALLTREPENYSNRRLIAA
AEERGHSVEVIDTSRCYMKIQGVGAEVHYDGRKLPHFDAIIPRIGASITSYGTSVVRQFE
STGTYCLSGSEGISISRDKLHAHQVLARHRIGMPDTAFARSPKDSKNLINLVGDAPVILK
LLESAQGKGVVLAETRKAAESVISAFRGLKADFLVQHFVKEAAGEDIRCIVLGGKVVAAM
RRQGPPGEFRSNLHQGGSAQKVRITKQERETALKAARAMRLEFAGVDLLRFENGPKVLEV
NSSPGLEGIEKTTGKDIAAQVIEHIEKQVAPKLPRTKRRK
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgacccgtttttccgtgggttgggaagaatggttggcccttcctgaactgggcctgccc
gccgtgaaggccaaggtggataccggggcgaaaacgtctgccctgcacgcatttgcaatc
gaacctttcggcccggcggatcgcccgatggtgcggtttgccattcacccggacccggat
gatgccgcgttggaaatcatctgctctgccccgttgaaagaccgccgcgaggtcacctcg
tcaaatggcgaaacggagctgcgatttgtgatcgaaacggtgatctcgatgggcgagcat
agctggccgatcgaggtgacactgaccgatcgcggggcaatggcctatcggatgttgctg
gggcgcaccgcgctgacgggggacgttcaggtcatgcctgcgctcagtttccagcagccg
gtgctgagttttgatgcctatcggagcttccctcgcagcaactggaccaaacgcgccctg
cgcttggcgctcctgacgcgtgagcctgagaactattcgaaccgccgcctgattgccgcc
gccgaagagcgcgggcattcggtggaagtgatcgacacgtcgcggtgttacatgaaaatt
cagggggttggggccgaagtgcattatgatggccgcaagctgccccattttgatgcgatc
atcccgcgtatcggggcgtcaatcacctcctatggcacctcggttgtgcgtcagtttgaa
agcaccggcacctattgcctgtccggttcggaagggatctcgatctcgcgcgacaagctg
catgcgcatcaggtcctggcacgccaccggattggcatgcctgacaccgcttttgcgcgc
agcccgaaagacagcaagaacctgatcaatctggtcggtgacgctccggttattctgaaa
cttctggaaagtgcacagggcaagggggtggttctggcagaaacccgcaaggccgcggaa
agcgtgatttctgcgtttcgtgggttgaaggcggattttctggtccagcatttcgtaaag
gaagcggcaggcgaggatatccgctgtatcgttcttggcggtaaggttgtggctgcgatg
cgcaggcagggcccgccgggtgagtttcgctcgaacctgcatcagggtggcagtgcgcag
aaagtgcggatcaccaagcaggagcgcgaaaccgcgctgaaagccgcccgggccatgcgt
ctggaatttgccggtgtcgatctgttgcgctttgaaaacgggccaaaagtgcttgaggtg
aactcctctccggggctggaaggtatcgagaaaaccaccggcaaagatatcgccgcgcag
gtgattgagcatatcgaaaaacaggtggccccgaaactgccacggaccaagcggcgcaaa
tag
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