KEGG   Aliiroseovarius crassostreae: K3J57_06305
Entry
K3J57_06305       CDS       T08444                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
acro  Aliiroseovarius crassostreae
Pathway
acro02020  Two-component system
Brite
KEGG Orthology (KO) [BR:acro00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    K3J57_06305
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:acro02022]
    K3J57_06305
Two-component system [BR:acro02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   K3J57_06305
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 AAA_5 cREC_REC AAA_2 FleQ VpsR AAA_16 AAA AAA_19 nSTAND3 AAA_7
Other DBs
NCBI-ProteinID: UWP90274
LinkDB
Position
1314765..1316204
AA seq 479 aa
MSDTRGDILIVDDERDIRELISDILEDEGFSTRIAGTSDEAVAQVKSELPALMILDIWLK
DSDMDGIDILKMVKREHPEVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVIS
RAMEASNLRRENTALKRRDGSAKEMIGSSSAFKALKSNLDKVTKSNGRVLLSGPAGSGKE
LAARYIHTHSDRAAAPFVVVNSAAIDADRMEEVLFGRETVERGVEPGLLDEANGGVIYFD
EVADMPLGTQSKILRVLVDQRFQRVGGHDKVSVDIRVISSSNKDLQHEINEGNFREELFH
RLNVVPIAVPALADRREDIPELAAHFLETINAEQGLALRSLSEDAEAMLQAMSWPGNVRQ
LKNVIERVLILGDGTGPIQPHELPGNDPAEAAGEDGGLPRALPSALATLPLREAREAFER
EYLLTQINRFGGNISKTANFVGMERSALHRKLKSLGVVTGNKAGARVAYIAGESEEETA
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgagtgacaccaggggcgatattctgattgtcgatgacgagcgggacatccgcgagttg
atctcggatattcttgaagatgaggggttctccacccgcattgctggcacctcggacgaa
gcggtggcgcaggtgaagtccgaacttcccgcgctgatgatcctcgacatctggctgaaa
gacagcgacatggacgggatcgacatcctgaaaatggtcaagcgcgaacacccggaagtg
ccggtggtgatcatttccgggcatggcaatatcgagattgccgtcgcggcgatcaaacag
ggggcttatgactttatcgaaaagccgttcaatatcgatcagctgatggtggtgatttct
cgcgcgatggaggccagcaacctgcgacgcgaaaacaccgctctgaaacggcgtgacggg
tccgcaaaagagatgattggatcaagctcagccttcaaggcattgaaaagcaacctagat
aaagtcactaaatcaaatggccgcgtgttgctgtccggcccggccgggtcggggaaagag
ctggccgcgcgctatattcacacccattcagaccgcgccgcagccccgtttgtcgtggtc
aattccgcagcgattgacgcagatcggatggaagaggtgttgttcgggcgcgaaacagtg
gaacgcggggtggaacccggtcttctggatgaagccaatggcggggtgatctatttcgat
gaggttgccgacatgccgctcggcacccagtccaaaatccttcgcgttctggtcgatcag
cgttttcagcgggtcgggggacatgataaggtcagcgtagatattcgcgttatttccagc
tctaacaaagacttacagcatgaaattaatgaaggaaacttccgcgaagagctctttcat
cgactgaatgtcgtgccgattgccgtgcctgctctggccgatcgccgcgaagacatccca
gagcttgccgcgcattttctggaaacgatcaatgccgagcaggggctggccctgcgcagt
ttgagcgaagatgccgaggcaatgcttcaggcaatgagctggccgggcaatgtgcgtcag
cttaaaaacgtgatcgagcgggtgttgattctgggcgatggcaccggtcccattcaaccg
catgaacttcctggaaatgacccggctgaagctgcgggcgaagatggtggccttccgcgt
gcgctcccgtcggccctggcaaccctgccactgcgcgaagcacgggaagcgtttgagcgg
gaatatctactgacccagatcaaccgttttggcggcaatatctcgaaaactgcgaatttt
gtcgggatggagcgcagcgccctgcaccgcaaactgaaatctcttggcgttgtgaccggc
aacaaggcaggcgcacgcgtggcatatattgccggagaaagcgaagaggaaaccgcctga

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