Aliiroseovarius crassostreae: K3J57_08600
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Entry
K3J57_08600 CDS
T08444
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acro
Aliiroseovarius crassostreae
Pathway
acro03420
Nucleotide excision repair
acro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
K3J57_08600
03430 Mismatch repair
K3J57_08600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_08600
Enzymes [BR:
acro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3J57_08600
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
K3J57_08600
MMR (mismatch excision repair)
Other MMR factors
K3J57_08600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
PcrA_UvrD_tudor
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
UWP87992
LinkDB
All DBs
Position
complement(1811810..1814323)
Genome browser
AA seq
837 aa
AA seq
DB search
MSDIDDDDLFEEFEAGEPAPMAPAAPKIPLSQRVMGMGASYPTPYLDGLNPAQREAVEAL
DGPVLMLAGAGTGKTKALTTRIAHLLHTRTAQPNQILSVTFTNKAAREMKNRVAALLGQT
VEGMPWMGTFHSICVKLLRRHAELVGLKSNFTILDTDDQNRLLKQLIVAADIDEKRWPAR
LLSGVIDNWKNRAWTPAQVPTGDASAFNGKGVDLYYQYQERLKALNACDFGDLLLHMVTI
FQTHEDILAQYQRWFRYILVDEYQDTNVAQYLWLRLLAQGHKNICCVGDDDQSIYGWRGA
EVGNILRFEADFPGAKVVKLEQNYRSTAHILGAAAGIIRGNENRLGKELWTEAEGGDKVR
LIGHWDGDEEARWVGEEIEAMQSGTRGQDPRSLDDIAILVRASHQMRAFEDRFLTIGLPY
RVVGGPRFYERLEIRDAMAYFRLAVSQDDDLAFERIVNTPRRGLGDKAVQTIQIMARTNG
VSLVEGARLAVEQGAIKGKGAKGLRELVDGLDRWHAILRVQGLPLSDDDALIEQPGELAL
DLSALPKDLPKTHIELAEMILDESGYTGHWQNDKTPEAPGRLENLKELVKALEAFENLQG
FLEHVSLIMDNDSDDAEEKVTIMTLHAAKGLEYPAVFLPGWEDGLFPSQRSMDESGLKGL
EEERRLAYVGITRAEEICTISFASNRRVYGQWQSQLPSRFVDELPEEHVDVLTPPGLYGG
GYGAAAGGFDMGVGSQIEQRARHADAYNSPGWKRMQANTGGRLRAKSSPNEAKGLVIDLA
AVSSFTQGNRVFHQKFGYGTVMGVEGDKLDIEFDRAGAKKVLGKFLVPAEQAGDVPF
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatattgatgacgacgatctgttcgaagagttcgaagcgggggaacccgccccg
atggcgcctgctgcgccgaaaatcccgctgtcgcagcgggtgatggggatgggtgcgtca
tatccgaccccctatcttgacggactgaacccggctcagcgcgaagcggttgaggcattg
gacggtccggtcctgatgctggcaggcgcgggcaccggcaagaccaaggcgctgaccacg
cggattgcgcatctgctgcacacccgcactgcccagcccaatcaaatcctctctgtgacc
ttcaccaacaaggccgcgcgcgagatgaaaaatcgggtcgccgcgctgttgggacagacc
gtcgaaggcatgccctggatgggcacgttccactcgatctgtgtgaagctcctgcgccgt
cacgctgagctggttgggctgaaatcgaacttcactatcctcgatacagatgaccagaac
cgcctgctgaaacagttgatcgtcgcggcggatatcgatgaaaagcgttggcccgcgcgg
ctgttgtccggggtgatcgacaattggaagaaccgggcatggacccctgcacaagttccg
acgggggatgcttcggcctttaacggcaaaggcgtggatctgtattatcagtatcaagaa
cggctgaaggcgctcaatgcctgcgattttggtgatctgttgttgcacatggtcacgatc
tttcagactcacgaggatatcctcgcgcagtatcaacgctggttcagatatatcctcgtc
gacgagtatcaggacaccaacgtcgcccaatacctgtggctgcggttgctcgcacagggg
cataagaacatctgctgcgtgggcgatgatgaccagtcgatctatggctggcgcggggct
gaggtgggcaatatcctgcggttcgaggctgatttccccggcgcgaaagtggtgaagctg
gaacagaattaccgctctaccgcgcatattctgggggcggcggccgggatcattcgtggc
aatgaaaaccggctgggcaaagagctgtggaccgaggccgagggcggcgacaaggtgcgc
ctcataggccattgggacggcgacgaagaggcccgttgggtcggagaagagatcgaggcg
atgcagtccggcacacggggccaggatccgcgctcgcttgacgatatcgccatcctcgtg
cgcgcctcgcaccagatgcgcgcctttgaagaccggtttctgaccatcggtctgccctat
cgcgttgttggtggcccgcgcttttacgaacggctggagatccgcgatgccatggcctat
ttccggctggcggtcagtcaggacgatgatctggcgtttgagcggattgtgaacacgccc
cggcgcggattgggcgacaaggcggtgcagacgatccagatcatggcgcgcacaaatggc
gtgtcgctggtcgagggggcgcggcttgcggtggagcagggcgcgatcaagggcaagggg
gccaaggggctccgggaactggtcgacgggctggatcgctggcatgccattttgcgggtg
caggggctgcctctttccgatgacgatgcgctgatcgaacagccgggggaattggcgctg
gatctgagtgcgctgcccaaggaccttcccaagacgcatatcgagctggctgaaatgatc
ctcgacgaatccggctataccggccattggcagaatgacaaaacgcctgaggcaccgggg
cggcttgaaaacctcaaggaactggtgaaggcgctggaagcgtttgaaaacctgcaaggc
ttcctcgaacatgtcagcctgatcatggacaatgacagtgacgacgccgaggaaaaggtc
acgatcatgacgctgcatgcggcgaaggggttggaatatcccgccgtgtttttgccgggc
tgggaagacgggctgttcccgtcgcaacggtcaatggatgaaagcggcctcaaggggctc
gaagaagaacgccgcctcgcctatgtgggcatcacccgcgcggaggagatctgcacgatt
tcctttgcctcgaatcgtcgggtctatggccagtggcaatcgcaattgccgtcgcgtttc
gttgatgaactgcccgaagagcatgtcgatgtgctgaccccgcccggcctttacgggggc
gggtatggggctgcggcgggcggttttgatatgggggtcgggtcgcagatcgaacagcgc
gccagacatgctgatgcctataactcgccgggatggaagcggatgcaggccaataccggc
gggcgtttgcgcgccaagtccagcccgaatgaggcaaaagggctggtgatcgatctggcg
gcggtcagctccttcacgcagggcaaccgcgttttccatcagaaattcggctatggcacg
gtgatgggggttgagggcgacaagctcgatatcgaatttgaccgggcgggcgccaagaag
gtactgggcaagtttctggttccggcggaacaggctggcgacgtgccgttctga
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