Aliiroseovarius crassostreae: K3J57_08605
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Entry
K3J57_08605 CDS
T08444
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acro03032
]
K3J57_08605 (topA)
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_08605 (topA)
Enzymes [BR:
acro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
K3J57_08605 (topA)
DNA replication proteins [BR:
acro03032
]
Prokaryotic type
DNA Topoisomerases
K3J57_08605 (topA)
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
K3J57_08605 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
UWP87993
LinkDB
All DBs
Position
1814577..1817156
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AA seq
859 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGKDYTVLASYGHVRDLPAKNGSVDPDHGFDMVWEVGNDSKK
HVRAIADALKEDNALILATDPDREGEAISWHLEEALRKRRSIKKDTPVSRVTFNAITKDA
VLDAMANPRQVDSDLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REQEIEAFNAREYWSVKAALATPRGQEFEAKLTVLGGDKLDKHSLANETAAEMAVQAISS
RDLTVRSVEAKPANRNPSPPFMTSTLQQEASRKFGFGARQTMSTAQRLYEAGYITYMRTD
GIDMAPEAVAAARDAIAARFGKEFTPEKPRVYKNKAKNAQEAHECIRPTDMNVSAEDLGR
LEPDQRKLYDLIWKRTLASQMESARFERTTVEIGSDDGQVGLRATGQVVVFEGFLKVYEE
GRDDAVVDEDDKRLPQIMQGEPAAKRTITPEQHFTQPPPRYTEATLVKRMEELGIGRPST
YASVITTIQDREYVRKDKNRLFPEDKGRIVTIFLVNFFRKYVGYEFTANLEEELDEISAG
EANYKDVLTRFWRDFSAAIGETSELRISEVLDKLDAALAPQLYPPREDGTDPRSCPKCGT
GQLHLKTSRTGGFVGCGNYPECNYTRPISGEGAEGYERVLGEDNGDEIHLKSGRFGPYVQ
RGEATPENKKPPRSSLPKQGKEFLPGWGPNELTLEQAVTLLTLPRTIGQHPDGGAIQSNL
GRFGPYIAHQLPDEEKPVYVNLKETLDVFEIGMNRAVEMLAEKRANPGRGRGRAAAKPLK
ELGEHPEDGGAVNILDGRYGPYVKWEKVNATIPNDVKPEDVTMEMAVALIAEKSAKKKPA
RKKAAAKKAAPKKKAAAKK
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atgcccgtcgttgttgtcgaaagcccggccaaggccaaaaccatcaataaatatctcggc
aaggattacacggtgctggcctcttatggccatgtgcgtgacctgccggccaaaaatggc
tcggtggacccggaccatggattcgacatggtgtgggaggtcgggaacgactcgaaaaaa
catgtgcgcgcgattgccgatgcgctgaaagaagacaacgccctgatcctcgcaaccgac
cctgatcgcgaaggggaagcgatttcgtggcatctggaagaagcgctgcgcaagcgccgt
tcgatcaagaaagacacgccggtcagccgcgtgaccttcaacgcgatcaccaaggatgcg
gtgctggatgcgatggccaatccgcgccaggtggacagtgatctggtcgaggcctatctg
gcccgccgggcgctggattaccttgtgggcttcaacctgtcgccggtcctgtggcgcaaa
ctgccgggcgcgcggtctgctggtcgggtgcaatcggtctgcctgcgcctgatcgtcgag
cgcgaacaggaaatcgaagcgtttaacgcccgcgaatactggtcggtcaaggccgcgctc
gccaccccgcgcggtcaggaatttgaagccaagctgacggttctgggcggcgacaagctc
gacaaacacagtcttgcgaatgaaaccgcagctgaaatggccgttcaggcaatttcctcg
cgcgatctgaccgtgcgctcggtggaagccaaacccgccaatcgcaacccgtcaccgccc
ttcatgacctcaaccctgcaacaggaagccagccgcaagttcggctttggtgcgcgacag
accatgtcgaccgcgcagcggctttatgaagcgggttacatcacctatatgcggaccgac
gggatcgacatggcacccgaagcggtcgctgcggcgcgtgacgcaattgccgcgcggttt
ggcaaggaattcaccccggaaaaaccccgcgtttacaagaacaaggccaagaatgcgcag
gaagcgcacgaatgtatccgcccgaccgatatgaacgtctcggccgaggatctgggtcgg
ctggaacccgatcagcgcaagctttatgacctgatctggaaacgcacgctcgccagccag
atggaaagcgcccggtttgaacgcaccacggttgagatcggatcagacgatgggcaggtt
ggcctgcgcgccaccgggcaagtggttgtctttgaaggtttcctgaaggtctacgaagaa
ggccgcgacgacgctgttgtcgatgaggatgacaagcgcctgccgcagatcatgcagggc
gaaccggctgcgaaacgcacgatcacgcctgagcagcacttcactcagcccccgccccgt
tataccgaggcgacactggtcaaacggatggaagagctgggtatcggccgcccgtccacc
tatgcctctgtgatcaccacgatccaggaccgcgaatatgtgcgcaaggacaagaaccgc
ctgttccccgaggacaagggccggatcgtgaccatcttcctggtcaatttcttccgcaaa
tatgtgggctatgaatttaccgcgaacctggaagaagagctggatgaaatctcggcgggt
gaggccaattacaaggatgtgctgacccggttctggcgcgatttctcggccgcgatcgga
gagacatccgagctgcgcatttccgaagtgctcgacaaactggacgcggcccttgccccg
cagctttacccgccgcgagaagacggcaccgacccgcgcagctgccccaaatgcggcact
ggtcaactgcacctgaaaacctcacgcaccggcgggtttgtcggctgcgggaactaccct
gaatgcaactatacccgcccgatttccggtgaaggggcagaagggtatgaacgggttctg
ggcgaagataatggcgatgagatccacctgaaatccggtcgtttcggtccctatgttcaa
cgcggcgaagccacgcccgagaacaagaaaccgccacgctcctcgctgccgaaacaaggc
aaggaattcctgcccggctggggtccgaatgagctgacgctggaacaggccgtgaccctt
ctgaccctgccgcgcaccattggccagcacccggacgggggcgcgatccaatcgaacctt
ggccggttcgggccttacattgcgcaccagttgcccgacgaggaaaaaccggtttacgtg
aacctcaaggaaacactggacgtgtttgaaatcggcatgaaccgcgcggtcgaaatgctc
gcggaaaaacgcgccaatccgggccgtggccgcggacgagcagccgccaagccgctcaag
gaactgggagagcacccggaagacgggggggctgtgaacatccttgatgggcgctatggg
ccttacgtgaaatgggaaaaggtcaatgcgaccattccaaacgatgtgaaacccgaagac
gtgacaatggagatggccgtggcgctgattgccgagaaatcggcgaaaaagaagcctgcc
aggaaaaaggctgccgcaaaaaaggctgcaccaaagaaaaaagccgctgccaagaagtga
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