Aliiroseovarius crassostreae: K3J57_11405
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Entry
K3J57_11405 CDS
T08444
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
acro
Aliiroseovarius crassostreae
Pathway
acro03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
K3J57_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_11405
Enzymes [BR:
acro01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
K3J57_11405
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
K3J57_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
UWP88497
LinkDB
All DBs
Position
2389719..2390516
Genome browser
AA seq
265 aa
AA seq
DB search
MESPALSDLDWHIARAHLDWQVELGVTDAICDAPINRYELEARKPKTAAPTPLASPPAHV
LDPEVDWVARAKEAAARAQDLEALRAALEVFDGCDLKKGARNTVLADGNPAARVMIIGEA
PGRDEDIQGKPFVGRAGGLLDRMFAAINMGRTAALSKDALYITNVMPWRPPQNRDPSPEE
MAMMVPFLQRHVQLVAPELIVLMGNTPCQAVLGKRGITRMRGRWEEAWHKPVLPMFHPAY
LLRNPAAKREAWADLLELQARLRDL
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atggaatcacccgcgctctctgatctcgactggcacatcgcccgcgcccatctcgactgg
caggtcgaactgggggtgacggatgcgatttgcgatgcgccgatcaaccgctatgagctg
gaggcgagaaagcccaaaaccgccgcgccgacaccgctggcctccccgcccgcgcatgtg
ctcgaccccgaggtggactgggtcgcccgcgcgaaagaagccgccgcacgggcacaggat
cttgaggccctgcgtgccgcattggaggtgttcgatggctgcgacctcaagaaaggggcg
cgcaacacggtgctggccgatggcaaccccgccgcccgggtgatgatcatcggcgaggcc
ccggggcgggacgaagatattcagggcaaacctttcgtgggccgcgccggtgggctgctg
gaccggatgtttgccgccatcaacatggggcgcaccgcagcactgtcaaaagacgcgctc
tacatcaccaatgtgatgccctggcgcccaccgcaaaaccgcgaccccagccccgaggaa
atggccatgatggtgcctttccttcagcgtcacgtccaactggtcgcccccgagctgatt
gtgctgatgggcaacacgccctgtcaggcggtccttggcaagcgcgggatcacgcggatg
cggggacgttgggaggaggcatggcacaaaccggtcctgccgatgttccacccggcctat
ctgctgcgcaacccggccgcaaaacgcgaggcctgggcggatctgctggaattacaggcc
cggctgcgcgatctctga
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