Aliiroseovarius crassostreae: K3J57_12395
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Entry
K3J57_12395 CDS
T08444
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acro03016
]
K3J57_12395 (truB)
Enzymes [BR:
acro01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
K3J57_12395 (truB)
Transfer RNA biogenesis [BR:
acro03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
K3J57_12395 (truB)
Prokaryotic type
K3J57_12395 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
ScpA_C
DUF4945
Motif
Other DBs
NCBI-ProteinID:
UWP88674
LinkDB
All DBs
Position
2589625..2590530
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AA seq
301 aa
AA seq
DB search
MARKRKGRDIHGWLVVDKPAGISSNAVVNKVRWAMDAKKAGHAGTLDPEATGVLAVALGE
ATKTVPYVTDTLKAYRFTVRLGQATNTDDAEGEVISETTARPSDDDIEAALDQFTGQIMQ
VPPKFSAIKIDGERAYKLARDDEEFEIAARPLWVEELRMVGRDDADHVTLEMTCGKGGYV
RAIARDLGEALGCFGHVRELRRIWSGPFEVEDGVSMELVESLSKTGELDQYLLPLEDGLF
ELPELICTAEGATRLKHGNPGMVLGSDVEYGDEAWASFEGKAVAVGIFRSGELHPSRVFN
Q
NT seq
906 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaaacgcaagggacgcgacattcacggctggttggttgtggacaagcccgcg
ggcatcagctcaaacgcggtggtgaacaaggtgcgctgggcgatggacgcaaaaaaagcg
ggccacgcgggcacattggacccggaagccaccggcgttcttgccgttgcgctgggggag
gccaccaagacggttccttacgtgacggacacgctgaaggcctatcgcttcaccgtgcgg
ctgggacaggcaaccaacaccgatgacgctgagggtgaggtgatttccgaaacaactgca
cgcccgtccgatgatgacatcgaggcagcccttgaccagttcacaggtcagatcatgcag
gttccgcccaaattttctgccatcaagatcgatggtgaacgcgcctacaagctcgcccgg
gacgacgaagaattcgagattgccgcgcggccactttgggtcgaggaactgcggatggtc
gggcgcgatgatgcggatcatgtaacgctggaaatgacctgcggcaaaggggggtatgtg
cgtgccattgcccgcgatttgggcgaagcccttggctgttttggccatgttcgcgaattg
cgtcggatctggtccggcccgtttgaggttgaggatggtgtcagcatggaactggttgaa
agcctctccaaaacaggtgagctggaccaatatctgctgcctctggaagacggtctgttc
gaactgcccgaactgatttgcaccgcagagggtgccacgcgcctgaaacatggcaatcct
ggcatggtgctgggatccgacgtggaatatggcgatgaagcctgggcctcctttgaaggc
aaagctgttgcagtagggatattccgctcgggtgaattgcacccaagccgcgttttcaat
caataa
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