Aliiroseovarius crassostreae: K3J57_14105
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Entry
K3J57_14105 CDS
T08444
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acro03016
]
K3J57_14105
Enzymes [BR:
acro01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
K3J57_14105
Transfer RNA biogenesis [BR:
acro03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
K3J57_14105
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
CNOT1_HEAT
Motif
Other DBs
NCBI-ProteinID:
UWP88968
LinkDB
All DBs
Position
complement(2953434..2954045)
Genome browser
AA seq
203 aa
AA seq
DB search
MTNTLYKRDLPDGLDLGPVVAIDCETMGLNPHRDRLCVVQMSGGDGNAHLVQIEKGQTSA
PNLERMLTNPNVLKIFHFGRFDIAAMLNAFGVVTAPVYCTKIASKLVRTYTDRHGLKNLL
DQLLKVDISKQQQMSDWGAEELSNAQLDYAASDVLYLHRLKEELDARLAREGRTEMAQAC
FDFLPMRAQLDLAGWPEQDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacacgctttacaaacgtgacctgccggatgggctggatcttgggccggtggtg
gccatcgactgtgaaaccatggggctgaacccgcaccgcgaccggctgtgtgtggtgcag
atgtccgggggggatggcaacgcgcacctggttcagatcgagaagggtcagacctctgcc
cccaacctggaacgtatgctgaccaaccccaatgtgctgaaaatctttcatttcggccgg
tttgacatcgccgccatgctgaatgcctttggcgtggtcacggcaccggtctattgcacc
aagatcgcctcgaaactggtgcgcacctatacggatcggcacgggctgaaaaaccttctg
gatcagctgctgaaggtggatatttccaaacagcagcagatgagcgactggggcgcggaa
gagctgagcaacgcgcagctcgactatgctgcctcggacgtgctttacctgcaccgtctg
aaagaagagctggacgcgcgcctggcacgcgaagggcgcacagaaatggctcaggcctgc
tttgattttctgccgatgcgcgcacaacttgatctggcaggttggccggaacaggacatc
ttcgcccattag
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