Aliiroseovarius crassostreae: K3J57_14280
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Entry
K3J57_14280 CDS
T08444
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
acro
Aliiroseovarius crassostreae
Brite
KEGG Orthology (KO) [BR:
acro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acro03400
]
K3J57_14280 (addA)
Enzymes [BR:
acro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
K3J57_14280 (addA)
DNA repair and recombination proteins [BR:
acro03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
K3J57_14280 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DUF2800
DUF3638
Motif
Other DBs
NCBI-ProteinID:
UWP89002
LinkDB
All DBs
Position
complement(2985842..2989213)
Genome browser
AA seq
1123 aa
AA seq
DB search
MFNEATQRQIDAADPGSSTWLSANAGSGKTRVLTDRVARLLLDGVSPQNILCLTYTKAAA
SEMQNRLFKRLGEWAMKDDDALQNALADLGIPTAAHDLRQARRLFARAIETPGGLKIQTI
HAYCAGLLRKFPMEAGVSPQFKEMDDRAAKLLRTEIIDQMAQEQPELVANLARYYTAEDF
DGLAADITHNRSHFLTNISESDIRKWFDIPATLTEQQVLERAFAPGDGLVLERLLPLLNP
DNRNDAASARKLAAILPLKASIQSLIQLETLFLSEKGAGAGRPKKTFPSAAVKKDTGKDL
MPHLEQMMERVADTKPLRSGLYSALKTTALHQFATRFVAHYELAKQQRGWLDFDDLIVKA
GDLLTDPAVAAWILYRLDGGIDHILVDEAQDTSPAQWRVIDKLSREFTSGLGARDDVNRT
IFVVGDPKQSIYSFQGARPDKFEEMRDSFRDKLGQIGKPFQDLPMEFSFRSSPAILQFVD
HALHDQGGLGDAFKHRAFFDKPGRVDLWPVIEPVKFEETRDWFDPIDKLGEEDHRIQLAR
KIAREIKRIIETESLPAENGESRPVHAGDFLVLLRKRSDLFHEIIRACKQEGLPIAGADR
LRIGGELAVKDLKALLSFLATPEDDLSLACVLRSPLAGLSEQDLFRLAHPRGKNTYLWRA
LRDQREHFPTLVQMLTELRDDADFLRPYELIERVLTRFNGRSKLLARLGQEAEDGIDALL
AQALAYERLETPSLTGFVNWLEMEEVTIKRQMDTVDQQIRVMTVHGSKGLEAPIVILPDL
ARSQYRNRDELVELDGGHAIWKPSTTDRTTAVEAALARDRQAQEEEATRLLYVAMTRAEQ
WLILAATGTIGKAPTEWYNIATEAMERAGGTIVDLGENSFRRFELGLWPAQAAAQTKPAP
QTEVSDSLPKWAAEPAKLPTEELALVSPSDLGGAKAIFDPNQAELDEESAKRRGRQIHLL
LEHLPSYAPSLWSEYSQTLLSTGDDSAPPEDIAEILKEARGVLTSAELAHIFTPDTLAEV
EVTAPLPGYDRVLYGIIDRLIVAEHTVTVVDFKSNRVVPASAADTPEGVLRQMAAYRAAL
LQIYPQHSIEAAILWTHHAKLMPLDPNLLEEAYRRLDVGGAAP
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcaacgaagccacgcagcgccagattgatgccgcagatcccggcagctccacctgg
ctgtccgccaatgctgggtcgggaaagacacgcgtgctgacagaccgtgttgcgcgtctg
ctgctggacggggtcagcccgcagaacattctgtgcctgacctacaccaaggccgctgcc
agcgaaatgcagaaccggctgttcaaacggcttggggaatgggcgatgaaggacgatgac
gccctgcagaacgccttggcggaccttggcatccccacagctgcgcacgacttacgccag
gcccgccgactgtttgcgcgggccatcgaaacccctggcggtctgaaaatccagaccatc
catgcctattgcgctgggttgctgcgaaaattcccgatggaggccggggtctctccgcaa
ttcaaggaaatggacgatcgcgcggcaaagcttctgcgaacggaaatcatcgaccaaatg
gcgcaggagcagcctgaattggttgccaatctcgcccgctattataccgccgaagacttt
gatggtcttgccgcggacattactcataaccgttcccatttcctgacaaacatatctgaa
agcgacattcggaaatggttcgatattcctgccacccttaccgagcaacaggtgctggag
agggcgttcgcacccggagatgggctggttctggaacggcttctcccccttctgaacccg
gacaaccgaaatgacgcggcatcagcacggaaattggccgcgatcttgccgttaaaagcg
tcaattcagtctctcatccagcttgaaacgctctttttgtcagaaaagggcgcgggggcc
gggcgcccgaaaaagacatttcccagtgccgccgtcaagaaggacactggcaaggacctg
atgccacatctggaacagatgatggagcgggttgcagatacaaaacctctccgatctggg
ctgtattcggcgctgaaaacaactgccctacatcaattcgccacccggtttgttgcccat
tacgaattggccaaacaacaacgcggctggcttgattttgatgatctgattgtcaaggca
ggtgatttgctgaccgacccggcggttgcggcctggatcctctaccgtctggacggtggc
attgaccacatcctggtggatgaagcgcaggacaccagcccggcccaatggcgcgtgatt
gacaaactgtcacgcgaattcaccagcggtctgggcgcgcgcgatgacgtcaaccgcacc
attttcgtggtcggagaccccaagcaatccatctattcctttcaaggggcacgtccggac
aagtttgaagaaatgcgggacagtttccgcgacaagcttgggcagattggaaagccgttt
caggacctccccatggagttttccttccgctcatccccggccattttgcaatttgtcgac
catgccctgcatgatcagggtgggctgggggatgcgttcaaacaccgcgcttttttcgac
aaaccgggtcgggttgacctgtggccggtgatcgaaccggtgaagttcgaggaaacccgc
gactggttcgatcccatcgacaagctgggggaagaagatcaccgcattcaattggcccgc
aagattgcccgtgagatcaaaaggatcatcgaaacagagtctcttcccgcggaaaatggc
gaaagcaggccggttcatgcgggggactttctggttctgctgcgcaagcgcagcgacctg
tttcatgaaatcattcgcgcctgcaagcaggaaggattgcctattgcgggcgcagatcgg
ctgcgtattgggggggagctggcggttaaggacctgaaggccctgctctcatttcttgcc
acgcctgaagatgatctttccctggcctgtgtgctgcgctcacctctggcgggtctgagc
gaacaggacctgtttaggctggcccatccccgcggcaagaacacctatctctggcgggcg
ctgcgggatcagcgtgaacactttccgacgctggttcaaatgctaacagagctgcgggat
gatgccgactttctgcgcccgtatgaactgattgaacgggtgctgacgcggttcaatggt
cgcagcaaactgctggcgcgtctggggcaagaagccgaggatggcattgatgcgctgctt
gcacaggcgcttgcctatgaacgtctggaaacacccagcctgaccggttttgtgaactgg
ctcgagatggaagaggtcaccatcaagcgccagatggataccgtggatcaacagatccgc
gtgatgaccgtgcacggatcgaagggattggaagccccgattgtcatccttcccgatctt
gcccgcagtcaatatcgcaaccgggacgagctggttgagctggacggcggccacgcgatc
tggaaaccctcgacgacagatcgcacaacagcggttgaggcagccttggcgcgcgatcgc
caggcacaggaagaagaggccacacggctgctttacgtggcgatgacccgcgcggagcaa
tggcttattctggccgccaccgggacaatcgggaaagcaccaaccgagtggtacaatatc
gccaccgaggccatggagcgtgcaggcggcacgattgtcgacttgggcgagaacagcttc
cgcaggttcgaactcgggctctggcctgcccaggcggcggcgcaaacaaaaccagcaccc
cagaccgaagtgtcagacagcttgccgaaatgggcagcggaaccagcaaagcttcccacc
gaggaactggctctggtctccccttccgatctggggggagcaaaagccattttcgaccct
aatcaggcggaacttgacgaagaaagtgccaagcggcgcggccggcaaatccatctgttg
ctggagcatctgccgagttatgcaccctctctctggtccgaatactcccaaacccttctg
tccaccggggatgacagtgccccgcctgaagacattgcagaaatcctgaaagaggcgcga
ggggttttaacctcggctgagctggcacatattttcacacccgacacccttgccgaggtt
gaggtgaccgccccattgcccggatatgaccgggtgttgtatggcattatcgaccggttg
atcgtggccgagcacaccgtcaccgtggtcgatttcaagtcaaaccgcgtggtgccagcg
tctgcagccgacacgcccgaaggggtattacggcagatggcagcctatcgggcagcactt
ttgcagatctatccacagcacagcattgaggccgcgatcctgtggacccatcacgcaaaa
ctgatgccgcttgaccccaacttgctggaggaggcatatcggcgccttgacgttggcggg
gcggctccatag
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