Alysiella crassa: LVJ80_00130
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Entry
LVJ80_00130 CDS
T08264
Symbol
rnz
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acrs03016
]
LVJ80_00130 (rnz)
Enzymes [BR:
acrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
LVJ80_00130 (rnz)
Transfer RNA biogenesis [BR:
acrs03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ80_00130 (rnz)
Prokaryotic type
LVJ80_00130 (rnz)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
PDEase_II
AbiEi_4
Motif
Other DBs
NCBI-ProteinID:
UOP06951
LinkDB
All DBs
Position
complement(1877376..1878308)
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AA seq
310 aa
AA seq
DB search
MNIHFLGTASGSPSKERNVTSIALNLMKENGEIWLFDCGEATQHQILHTAIRPSKIRRIF
ITHLHGDHIFGLLGLLCSRSFLSAAEPTPLTLYGTKGLRQFVETGLHISQSYLTYPLEII
ELDDEGVALDTPNFRVLYRTLAHGMPSYAYKIVEADHAGSLKTEELAALGIPKGALYGAL
KRGETVVLPNGNTLNGKDFIEPPRKGREVVIFGDTTFQPEFADFCRGADVLVHESTFDAE
DMENARKFGHSTCTQAAELAKLAQVKRLILTHISAKYSGDKALNLLNDAQAIFPNTELAR
DFWEMEIALS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacactttttgggaactgcttcgggttcaccgtccaaagaacgcaatgtaaca
tctattgcattgaatttaatgaaagaaaatggcgaaatttggctatttgactgcggcgaa
gccacgcaacatcaaattttgcataccgctattcgccccagcaaaattcgccgcattttc
attacccatttgcacggcgaccatatttttggcttactcggtttgctgtgcagccgctca
tttttgagtgccgccgaacccacgccactcacgctgtatggcacgaaaggtttgcggcaa
tttgtggaaacaggtttgcacatttcgcaaagttatctgacttatccattggaaatcatt
gaattagacgatgaaggcgtggcattggacacgcccaattttcgtgttttataccgtact
ttggcgcatggcatgccatcatacgcctacaaaatcgtggaagccgaccacgcaggcagc
ctgaaaaccgaggaattggcggcgttgggcatacccaaaggtgcattgtatggcgcactc
aaacgcggcgaaacggtggttttgcccaatggcaacacattgaatggcaaagattttatt
gagccaccacgcaaagggcgtgaagtggtgatttttggcgacaccacgtttcagcccgaa
tttgcggatttttgtcgcggtgccgatgtattggtacacgaaagcacatttgacgcggaa
gatatggaaaatgcgagaaaatttggacacagcacctgcacccaagccgccgaattggca
aaattggcgcaagtgaagcgtttgattttaacccacatcagcgcaaaatattcaggcgat
aaggcattgaatttattgaatgacgcgcaagccatttttccaaataccgaattggcgcgg
gatttttgggaaatggagattgcactgtcataa
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