Alysiella crassa: LVJ80_01330
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Entry
LVJ80_01330 CDS
T08264
Name
(GenBank) ribonuclease catalytic domain-containing protein
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
acrs03016
]
LVJ80_01330
Enzymes [BR:
acrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
LVJ80_01330
Transfer RNA biogenesis [BR:
acrs03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LVJ80_01330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
XHH48607
LinkDB
All DBs
Position
complement(1637712..1639610)
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AA seq
632 aa
AA seq
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MPNIFYEDAGSLKVAAIVQKTEATYQADTQHGKRVKIKSANVFLEFDGDMDNFLQAAQNE
AADMDTELLWEYVGTEEFSFDTAASEYFGKQVSKTQLAATLIALYAAPMYFHKKNKGVFK
AAPEDILKQALAAIERKAQQDAQMQTWADALVSGSLPDEIAAELPHILHAPDKQSLAYKA
FTKAMDTSKMSAFELAKHTGGITSMPQYLLQRFEVKYFPRGTGFPNIELPTLPENLEVAN
VQAFSIDDVSTTEVDDALSVQDLGGGAKRVGIHIAAPALGMEADSEMEKIVLQRLSTVYF
PANKITMLPENWVAAFSLDEGKAVPAFSIYFDVSADWQLSEPVSKIELVPIETNLRIQHI
EPFFNSETGVGSADNPQFKHHAECLYLLALAYELQKKRDRLEDPNLPKKYDYGIDFDEQG
KVIITRRERGSPIDTLVSEMMILANTSWAKLLHDKELGGLFRVQPSGRVRMSTHAEAHIG
MNVAHYGWFTSPLRRACDYINQKQLQSILTNTAPRFSKNDSDLFVALGSFEAAYTAYRAF
QDMMESYWAMVWLQQENIREINAVLLKEDLVRLDGLPLVARATGIPMEIAPKSMLRLAVV
DVDTEAQFVALKYLGIVPTATPIVDDDEEVNS
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgcccaatattttttacgaagacgcaggcagcctgaaagtcgccgccatcgtccaaaaa
acagaagccacctaccaagccgacacacaacacggtaaacgcgtcaaaatcaaatccgcc
aatgtgtttttggaatttgatggcgacatggacaactttttacaagccgcccaaaacgaa
gcggcagacatggataccgaattactctgggaatacgttggcacagaagaattttctttt
gacaccgccgccagcgaatatttcggcaaacaagtcagcaaaacccaactcgccgccacg
ctcatcgcactgtatgccgcgcccatgtattttcataagaaaaacaaaggtgtattcaaa
gccgcgcccgaagatattttaaaacaagcccttgccgccattgagcgcaaagcgcaacaa
gacgcacaaatgcaaacatgggcagacgcgctggtttcaggcagcctgcccgatgaaatc
gccgccgaattgccgcacattttgcacgcacccgataagcaatcgttggcgtacaaagca
tttaccaaagcgatggacaccagcaaaatgtccgcttttgaattggcaaaacacacgggc
gggattacgtccatgccgcaatatttattgcaacgctttgaagtgaaatattttccacgc
ggtacaggttttccaaacattgagctgcccacgctgcctgaaaatttggaagtggcgaat
gtgcaagcgttttccattgacgatgtgtccaccaccgaagtggatgacgctttgtcggta
caagatttgggcggcggcgcaaaacgcgttggcatacacattgccgcgcctgcactgggc
atggaagcggacagcgagatggaaaaaatcgtcttgcagcgtttgagtacggtgtatttt
cctgccaataaaattaccatgctgcctgaaaactgggttgccgcgtttagtttggacgag
ggcaaagccgtgccagcgtttagcatttattttgatgtgagcgcggattggcaattgtct
gaacctgtgagcaaaattgagttagtccccattgaaaccaatttacgcattcagcatatt
gagccgtttttcaacagcgaaacaggcgtgggcagcgcggacaatccgcaattcaaacac
catgccgaatgcttgtatttgctggcactcgcctacgaattgcagaaaaaacgcgatcgt
ttggaagacccaaatttgccgaaaaaatacgattacggcattgattttgatgagcaaggc
aaagtcatcattacgcgccgtgaacgcggttcgccgattgacacgctggtgagcgaaatg
atgattttggcgaacacgtcttgggcaaaattattgcatgataaggaattgggcggtttg
ttccgcgtgcaaccgagtgggcgggtgcgtatgtccacccacgccgaagcgcatattggc
atgaatgtggcgcattatggctggttcacatcgcccttgcgccgcgcctgcgattatatt
aaccaaaaacaattgcaaagtattttaaccaacaccgcaccgcgttttagcaaaaacgac
agtgatttatttgtggctttgggttcatttgaagcggcgtacacggcgtatcgtgctttt
caagacatgatggaaagttattgggcgatggtgtggttgcaacaggaaaatatccgtgaa
atcaatgctgtattattaaaagaagatttggtgcggctggacggtttgcctttggtggcg
cgggcaacggggattccgatggagattgcgcccaaatccatgttgcgtttggcggtggtg
gacgtggacacggaagcgcaatttgtggcgttgaaatatttgggcattgtaccgaccgcc
acgccaattgtggacgatgatgaagaagtgaattcgtaa
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