Alysiella crassa: LVJ80_02990
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Entry
LVJ80_02990 CDS
T08264
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acrs03032
]
LVJ80_02990 (topA)
03400 DNA repair and recombination proteins [BR:
acrs03400
]
LVJ80_02990 (topA)
Enzymes [BR:
acrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LVJ80_02990 (topA)
DNA replication proteins [BR:
acrs03032
]
Prokaryotic type
DNA Topoisomerases
LVJ80_02990 (topA)
DNA repair and recombination proteins [BR:
acrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LVJ80_02990 (topA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_PaaD
Lar_restr_allev
DUF1280
Toprim_4
Zn_ribbon_PADR1
Motif
Other DBs
NCBI-ProteinID:
UOP07403
LinkDB
All DBs
Position
1315389..1317716
Genome browser
AA seq
775 aa
AA seq
DB search
MSKNLLIVESPNKIKSVKKYLGGDFEVLASFGHVRDLIPKDGAVNPDDNFAMKYQIISKN
SKHVDAIVAAAKEADTIYLATDPDREGEAISWHIYEILKSKRGMKNVGEKIQRVVFHEVT
PKGVQAALQNPRGLDVNLIDAQQARRALDYLVGFNLSPLLWKKIRYGLSAGRVQSPALRL
ICERENEIRAFETQEYWTVHMDSHKGRTKFSAKLIQWQGNKLEQFSLPDENAQAAVLSAL
QGKTAQVSDVVKKKATRKPAAPYTTSTMQQDAVRKLGFTTDRTMRTAQQLFEGIDVGQGA
VGLITYMRTDSVTLSQDALTEIRHYIDNKIGADFLPSSPKIYKTKSKNAQEAHEAVRPTS
VYRSPESVKPFLSPDQFKLYQMIWQRTVACQMVDAKFDATTVDINVGDGVFRATGQVLVF
AGFLSVYQEGADEDDEAEESKKLPEMAVGDVLPVDKLYGEQHFTQPPPRFNEATLVKALE
EFGIGRPSTYASIIKTLKDREYVTVEQRRFQPTDTGDIVNKFLTEHFEQYVDYDFTAKLE
DQLDEIANGSRAWIPVMEKFWKGFHKQVVEKEGIERAKFTTQELDETCPQCGKHKLQIKF
GRAGRFVACAGYPECGYTRNVNETAEQAAERVAQEAAQQAELEGRSCPKCGGQLVYKTAR
SGSKFIGCANYPKCKHVEPLEKPKTTGVPCPQCGKGHLVERKSRFGTTFYSCDSYPDCKY
AVNHLPLNEPCPQCGWAITMRKVTKRWGVERVCPQKECGWKEQLEPPAGKNQSEE
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaaacctattaattgtagaatcccccaacaaaatcaagtctgtaaaaaaatac
ttgggcggtgattttgaagtacttgcctcattcggacacgtccgcgacctgattcccaaa
gatggcgcggtcaatcccgatgacaattttgccatgaaataccaaatcatcagcaaaaac
agcaagcacgttgatgccatcgtagccgccgccaaagaagccgacaccatttatctggca
accgaccccgaccgcgaaggcgaagcgatttcatggcacatttatgaaatcttgaaatcc
aaacgcggcatgaaaaacgtgggcgaaaaaatccaacgtgttgtttttcatgaagttacg
ccaaaaggcgttcaggcagccttacaaaatccgcgcggcttggacgtgaatttgattgac
gcgcaacaagcccgccgtgctttggattatttggtgggtttcaatttgtcgccgcttttg
tggaaaaaaatccgctacggcttgtcggctgggcgcgtgcaaagccctgctcttcgcctg
atttgcgaacgcgaaaacgaaatccgcgcctttgaaacgcaagaatattggacagtccac
atggacagccacaaagggcgcaccaaattttccgccaaactgattcaatggcagggcaat
aaattggaacagttttcgctgcccgatgaaaacgcgcaggctgccgtgttgtctgccttg
caaggcaaaacagcacaagtgtctgatgtggttaagaaaaaagccacacgcaaacctgcc
gcgccctacaccacgtccaccatgcagcaagacgcggtacgcaaactcggctttaccacc
gaccgcaccatgcgcaccgcccaacagctttttgaaggcatagacgtgggacaaggcgca
gtcggcttgattacctatatgcgtaccgacagcgtaaccctgtcgcaagacgcgctgacc
gaaatccgccattatattgacaacaaaattggcgcagattttctgccatcttcgcccaaa
atctacaaaaccaagtccaaaaacgcgcaagaggcacacgaggcggtgcgcccgacttcg
gtgtaccgttcgcctgaaagcgtgaaaccgtttttgtcgcccgaccaattcaagttgtac
caaatgatttggcagcgcacggtggcgtgtcaaatggtggacgcgaaatttgacgcaaca
acggtggacattaacgtgggcgatggcgtgttccgcgcgactggacaagtgttggttttt
gctggctttttgagcgtgtatcaagaaggcgcagacgaagacgatgaagccgaagaaagc
aaaaagctgcctgaaatggcggtgggcgatgtgctgcctgtggataaattgtatggcgaa
cagcattttacccagccgccaccgcgttttaacgaggcgactttggttaaggctttggaa
gaatttggcattggtcgtccgtccacttatgccagtatcatcaagactttaaaagaccgc
gaatacgttacggtggaacaacgccgtttccaacccaccgacacgggcgacattgtgaac
aaatttttgaccgaacattttgagcaatatgtggactacgatttcacggcaaaattggaa
gaccagcttgatgaaatcgccaacggcagccgcgcttggattcctgtgatggaaaaattc
tggaaaggtttccacaagcaagttgttgaaaaagaaggcattgaacgcgccaaattcacc
acgcaagaattggacgaaacctgcccacaatgcggcaaacacaaattgcaaatcaaattc
ggacgcgcagggcgttttgtggcgtgcgcgggctaccccgaatgcggctacacgcgcaat
gtgaacgaaaccgccgaacaagccgccgagcgcgttgcccaagaagccgcgcaacaagct
gaattggaaggcagaagttgccccaaatgtggcggtcagttggtgtacaaaacggcgcgt
tcaggcagcaaattcatcggttgcgcgaattatccgaaatgcaaacacgttgagcctttg
gaaaaaccgaaaaccacaggcgtcccctgcccacaatgcggtaaagggcatttggtggaa
cgcaaatcgcgttttggcacaacgttttacagttgcgacagctaccccgattgcaaatat
gcggtcaatcatttgccgctcaacgagccgtgtccacaatgcggctgggcaattaccatg
cggaaagtaaccaagcgttggggcgtggagcgtgtgtgtccgcagaaagaatgcggctgg
aaagaacagcttgaaccgcctgctggcaaaaatcaatcggaagaataa
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