Alysiella crassa: LVJ80_03270
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Entry
LVJ80_03270 CDS
T08264
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acrs
Alysiella crassa
Pathway
acrs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LVJ80_03270 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acrs03019
]
LVJ80_03270 (recQ)
03400 DNA repair and recombination proteins [BR:
acrs03400
]
LVJ80_03270 (recQ)
Enzymes [BR:
acrs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LVJ80_03270 (recQ)
Messenger RNA biogenesis [BR:
acrs03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LVJ80_03270 (recQ)
DNA repair and recombination proteins [BR:
acrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
LVJ80_03270 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HRDC
RQC
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
LRV
Motif
Other DBs
NCBI-ProteinID:
UOP07450
LinkDB
All DBs
Position
complement(1265907..1268228)
Genome browser
AA seq
773 aa
AA seq
DB search
MQTAQHILHDTFGYPEFRGKQADIVQTLLRGDNALVLMPTGGGKSLCYQIPALMRDGVAI
VVSPLIALMDDQVANLRAAGVHAAAVHSGTPPETVRQLADDIHSGSLKLLYVAPERLVSE
RFLKFLDNTTVSLFAIDEAHCVSQWGHDFRPEYQQLGLLAERYPHVPRIALTATADAETR
ADIKHYLKLENAPEFVSSFDRPNIYYQVIEKNNGKKQLLDFIQKQMHGQSGIVYCLSRRN
VEEIAAFLCEHGLHALPYHAGLSLEIRQQNQHRFTHEDNVIVVATVAFGMGIDKPDVRFV
AHLDMPQSIEHFYQESGRAGRDGLPAVSWLCYGMNTLLLLKERITESQASDFQKQIELQK
LNAMFDVCETAACRRQLLLRHFGEQSEPCGNCDNCLHPPAKFDGTEIVQKLLSCVYRVGQ
RFAASYVIEVLRGKSTDWIVQNGHDKLSTFGIGDNLSDKDWRNVARQCIGLGLLNNDMHN
YQALMLTEAAKPVLRGEQTVLLRPLKREKAATKVAKTDTWLRTEREERLWQALRQWRVAR
AKADDVPAYVIFGDKTLREVVEKLPKNQSDLREIYGMGEAKIGKFGDEILDIVAEFVSGS
LNVAQSEKTVSHQHSNPRDDELLRQLTVWREMAAKRDDVSLHAVCPEESLTDLVAFTPEQ
MVDLNMIYGLGEVKLGKYGKEILSICAPFSGSLNDEIKYKQLFLRDLQEWVAMKAEEAEL
PEFQILGKPAMRALANKLPETLDDLREIHGFDDEKIAEYGEELLEMIGAFQVA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccgcccaacacattctccatgacactttcggctatcccgaatttcgcggcaaa
caagccgacatcgtccaaacccttttgcgtggcgacaacgcgctggtactcatgcccaca
ggcggtggaaaatcgctgtgttatcaaatccctgcgctcatgcgcgatggcgtggcgatt
gtcgtgtcgcccctgattgcgctgatggacgaccaagtcgccaatctccgtgcggcaggc
gttcacgcggcggcggtgcatagcggcacgccgcccgaaaccgtgcgccaattggcagac
gatattcattcaggcagcctgaaactgctctacgttgcccccgaaaggctggtttccgag
cgttttttgaaatttttggacaacacgaccgtcagcctatttgcgattgacgaagcccat
tgtgtcagccaatggggacacgatttccgcccagaatatcaacaacttggcttactcgcc
gagcgttatccgcacgttccgcgcattgccctgaccgccaccgcagacgcagaaacccgc
gccgacatcaaacattatttaaaactggaaaacgcgcccgaatttgtgtccagctttgac
cgcccgaatatttattaccaagtgattgaaaaaaataatggtaaaaaacaattgcttgat
tttattcaaaaacaaatgcatgggcaaagcggcattgtttactgtttgagtcggcgcaat
gtggaagaaattgccgcgtttttatgtgaacacggtttgcacgcgctgccgtatcacgca
ggattgtctttggaaattcgccaacaaaatcaacatcgtttcacgcatgaagacaatgtg
attgtggtcgccacagtcgcctttggcatggggattgacaagcccgatgtgcgttttgtc
gcgcatttggacatgccacagagcattgagcatttttatcaggaaagcggtcgtgcgggg
cgtgatgggctgcctgcagtcagttggctgtgttatggcatgaacacgctgctcttgctc
aaagagcgcattactgaaagccaagcatctgatttccaaaaacaaattgaattgcaaaaa
ctcaacgccatgtttgacgtgtgcgaaacggcagcctgcagacggcaattattgctgcga
cattttggtgaacaatcagaaccttgcggcaattgcgataattgtttgcacccaccagcc
aaatttgacggcacggaaatcgtacaaaaattattgagttgcgtgtatcgcgtggggcag
cgttttgcggcgagttatgtgattgaagttttgcgtggtaaatcaacggattggattgtg
caaaatgggcatgataaattgtccacgtttggcataggcgataatttgagcgacaaagat
tggcgcaatgtggcgcgacaatgtattggtttaggcttattaaacaatgatatgcacaat
tatcaagccttaatgttgactgaagccgccaaacctgtgttgcgcggcgaacaaaccgtg
ttgttgcgcccactcaaacgggaaaaagccgcgacaaaagtcgccaaaacagacacttgg
ctgcgtaccgagcgcgaagagcgtttgtggcaagccttgcgccaatggcgcgtggcgcgg
gcgaaagcggacgatgtgcctgcttatgtgatttttggcgacaaaaccttgcgcgaagtg
gtggaaaaattgccgaaaaatcaatcagatttgcgtgaaatttacggcatgggcgaagca
aaaatcggcaaatttggcgatgagattttagacattgtggcggaattcgtttcaggcagc
ctgaatgttgcccaaagtgaaaaaacggtttctcatcaacactctaatccacgagacgat
gaattattacgccaactcacagtatggcgtgagatggcggcgaaacgcgatgatgtgtcg
ttgcacgcggtttgccccgaagaaagtttgacggatttggtggcgtttacgccagaacaa
atggttgatttgaatatgatttatggtttgggcgaagtgaaattgggcaaatatggcaag
gaaattttgtctatttgtgcgccattttcaggcagcctgaacgatgaaataaagtataag
caattgtttttacgagatttgcaagaatgggtggcgatgaaagcggaagaagccgaattg
cccgaatttcagattttgggtaaacctgcgatgcgcgcgctggcgaataaattgcccgaa
acgctggacgatttgcgcgagattcatggttttgatgatgagaaaatcgcggaatatggg
gaagaattgttggagatgattggagcttttcaggttgcctga
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