Alysiella crassa: LVJ80_06390
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Entry
LVJ80_06390 CDS
T08264
Name
(GenBank) integration host factor subunit alpha
KO
K04764
integration host factor subunit alpha
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acrs03032
]
LVJ80_06390
03036 Chromosome and associated proteins [BR:
acrs03036
]
LVJ80_06390
03400 DNA repair and recombination proteins [BR:
acrs03400
]
LVJ80_06390
DNA replication proteins [BR:
acrs03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
LVJ80_06390
Chromosome and associated proteins [BR:
acrs03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
LVJ80_06390
DNA repair and recombination proteins [BR:
acrs03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
LVJ80_06390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
WVELL
Motif
Other DBs
NCBI-ProteinID:
UOP07943
LinkDB
All DBs
Position
1231174..1231476
Genome browser
AA seq
100 aa
AA seq
DB search
MTLTKAELADILVEKVSSVSKNDAKEIVELFFEEIRTTLERGEEIKISGFGNFQLRDKPQ
RPGRNPKTGEEVPITARRVVTFHASQKLKGMVEHYYDKQR
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgaccaaagcagaactcgccgacattttggttgaaaaagtgagcagcgtaagc
aaaaacgatgccaaagaaatcgtagaattattttttgaagaaatccgcaccactttggaa
cgcggcgaagaaatcaaaatttcaggtttcggcaatttccaactgcgcgacaaaccacaa
cgccctggtcgcaaccccaaaactggcgaagaagtacccattaccgctcgtcgtgtcgtt
acgttccacgccagccaaaaattaaaaggcatggtggagcattactatgacaagcaacgc
tga
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