Alysiella crassa: LVJ80_08650
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Entry
LVJ80_08650 CDS
T08264
Name
(GenBank) sigma-54-dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
acrs
Alysiella crassa
Pathway
acrs02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LVJ80_08650
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
acrs02022
]
LVJ80_08650
02035 Bacterial motility proteins [BR:
acrs02035
]
LVJ80_08650
Two-component system [BR:
acrs02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
LVJ80_08650
Bacterial motility proteins [BR:
acrs02035
]
Pilus system
Twitching motility proteins
LVJ80_08650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_19
AAA_16
FleQ
HTH_30
HTH_SUN2
Tc-R-P
Motif
Other DBs
NCBI-ProteinID:
UOP05941
LinkDB
All DBs
Position
306778..308436
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AA seq
552 aa
AA seq
DB search
MIKNSLNRPVLVVDDEQDIRDLMEMTLMKMGLNVETAEGVNIAKKKLTENKYSLVLTDMR
MPDGSGLEVVEHIMSNNMDTPVAVITAFGNADQAVQALKIGAFDYLQKPITLAQLRTLVK
SAVKVQDEYLENKAKPDPETEDHSVAAEPVKKNTVATPPPVADVPTQMGWGDTDWHDMAD
MLKQNNTGRGRNPNVSGSLKNENEMVEPTVQSAQLDVVENTGSLKREADVPRILGSSQQI
EEARRLIRKLADSNVPVYISGESGTGKEQAARSIHELSSRADKPFIAVNCGAIPENLMES
EFFGYKKGSFTGADQDRLGFFQHAHGGTLFLDEVADLPLAMQVKLLRAIQEKAVRRIGDA
QEAKVDVRIISATHKNLEHLVDSGAFRQDLFYRLNVVTLKMPPLREMHEDLERLIVHLLR
KHHGTGIRMTAAARDALLHYGYPGNFRELENILERAVALASNNTIDVEDLQINHQPMDLD
SEHFPLAEDIAATGLPNFQMGHTQLQDYLDDVERQILQQALEYTKYNRTQAAKVLGISFR
SMRYRLDRLAIE
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgattaaaaacagtttaaatcgccccgttttggtggtggacgatgagcaagatattcgt
gatttgatggaaatgaccctgatgaaaatgggtctgaacgtggaaaccgccgaaggcgtg
aatattgccaagaaaaaattaacggaaaacaaatattcgctcgttttaaccgatatgcgt
atgcctgatggttcgggtttggaagtggtggaacacatcatgagcaacaatatggatacg
cctgttgccgtgattaccgcttttggcaatgccgaccaagcggtgcaagccttgaaaatt
ggcgcgtttgattatttgcaaaaaccgattacgctggcacaattgcgtactttggtcaaa
tctgccgttaaagtgcaagatgaatatctggaaaacaaagccaaacctgaccccgaaacc
gaagaccattcggttgcggctgaacctgtgaaaaaaaatacagttgccacgccgccacct
gtggcagatgtgccaacacaaatgggttggggcgacacggattggcatgatatggcggat
atgcttaagcaaaataatactgggcgtgggcgcaatccaaatgtttcaggcagcctgaaa
aatgaaaatgaaatggttgaaccaacggttcaatcagcacaattagacgtggtggaaaac
acaggcagcctgaaacgcgaagccgatgtgccacgcattttgggcagctcgcagcaaatt
gaagaagcccgccgcctgattcgcaaattggcagacagcaatgtgcctgtctatatttcg
ggcgaaagtggtacgggtaaggaacaagcggcgcggagcatacacgaattgtccagccgc
gcagataagccgtttattgcggtaaactgtggcgcgattcctgaaaatttgatggaaagc
gaattttttggttacaaaaaaggcagtttcacgggcgcagaccaagaccgtttgggcttt
ttccaacacgcacacggcggcactttgtttttggacgaagtggcggatttgccgcttgcc
atgcaagtgaaattgctccgcgccattcaagaaaaagccgtgcgccgcattggcgacgcg
caagaagccaaagtagatgtccgcattatttccgccacgcataaaaatttggagcatttg
gtggacagtggcgcattccgccaagacttgttttatcgcctgaatgtggttacgctgaaa
atgccgcctttgcgcgaaatgcacgaagatttggaacgcctgattgtccacttattgcgc
aaacatcatggcacgggcatacgcatgaccgccgccgcacgagacgcgttgttgcattac
ggctatccagggaatttccgtgaattggaaaatattttggaacgcgccgttgcccttgcc
agcaacaacacgattgatgtggaagatttacaaatcaatcatcaacctatggatttggac
agcgagcattttccattggcggaagacattgcggcaacgggtttgcccaatttccaaatg
gggcatacgcaattgcaagattatttggacgatgtggaacgccaaatcttgcagcaagca
cttgaatatactaaatataatcgcacccaagcggcgaaagtattggggattagtttccgc
agtatgcgttatcgtttggatcgtttggcgattgagtaa
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