Alysiella crassa: LVJ80_08685
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Entry
LVJ80_08685 CDS
T08264
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acrs03021
]
LVJ80_08685 (rpoH)
Transcription machinery [BR:
acrs03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LVJ80_08685 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
HTH_3
Sigma70_ECF
Sigma70_r4_2
SLC12
UCR_14kD
HTH_PafC
Ham1p_like
HTH_25
Motif
Other DBs
NCBI-ProteinID:
UOP05948
LinkDB
All DBs
Position
complement(297802..298668)
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AA seq
288 aa
AA seq
DB search
MTAFALPIPSGHGSLEQYIQTVNSIPMLSLEEETTLAERQLKGDIEAAKQLILSHLRVVV
SIARGYDGYGLNQADLIQEGNIGLMKAVKRFEPVHGARLFSFAVHWIKAEIHEFILRNWR
LVRIATTKPQRKLFFNLRSMRKSLNALSPKEAQDIADDLGVKLAEVMEMEQRMTGNDVTL
LAENPDDEENNFAPINWLADTDSEPSQQIAKQAHYALQTEGLQNALAQLDERSRRIVEMR
WLTDDGGLTLHELAAEYGVSAERIRQIEAKAMEKLRGFLAHEAENMAV
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atgacagcattcgcattacccattccgagcggacacggtagcttggagcagtatattcaa
acggtaaacagcattcccatgctcagccttgaagaagaaaccactttggcagaacgccaa
ttaaagggcgatattgaagcggcaaaacaattgattttgtcgcatttgcgtgtggtggtg
tccattgcgcgtggttacgatggctatggcttgaatcaggcagatttgattcaggaaggc
aatattggtttgatgaaagccgtgaaacgctttgaacctgtgcatggggcgcggctgttt
tcctttgcggtgcattggattaaggcggaaattcacgaatttattttgcgtaactggcgt
ttggtgcgcattgctaccactaaaccacaacgcaaattgttctttaatttacgcagcatg
cgtaaaagtttaaacgctttgtcgccaaaagaagcgcaggacattgccgatgatttgggc
gtgaaactcgccgaagtgatggaaatggaacagcgcatgacgggcaacgatgttaccttg
ttggcggaaaatcctgatgatgaagaaaataatttcgcgcccatcaattggctcgccgac
accgacagcgaacccagccaacaaatcgccaaacaagcccattatgctttgcaaacagaa
ggtttgcaaaacgctttggcgcaattagatgaacgcagtcgccgcattgtggaaatgcgt
tggctgaccgatgatggtggcttgacactgcacgaattggcagcagaatatggcgtatct
gccgagcgcattcgccaaattgaagccaaagcgatggaaaaattgcgcggctttttggcg
cacgaagcggaaaatatggcggtttaa
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