Alysiella crassa: LVJ80_08830
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Entry
LVJ80_08830 CDS
T08264
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
acrs
Alysiella crassa
Pathway
acrs03030
DNA replication
acrs03430
Mismatch repair
acrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ80_08830 (holB)
03430 Mismatch repair
LVJ80_08830 (holB)
03440 Homologous recombination
LVJ80_08830 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acrs03032
]
LVJ80_08830 (holB)
03400 DNA repair and recombination proteins [BR:
acrs03400
]
LVJ80_08830 (holB)
Enzymes [BR:
acrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ80_08830 (holB)
DNA replication proteins [BR:
acrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ80_08830 (holB)
DNA repair and recombination proteins [BR:
acrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ80_08830 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
DNA_pol3_delta
AAA
Motif
Other DBs
NCBI-ProteinID:
UOP05968
LinkDB
All DBs
Position
274584..275567
Genome browser
AA seq
327 aa
AA seq
DB search
MIYNWHTTAWQHITAHWHTPANAWLIIGKQNTGKIAFAQHFAQALLCETPQAQHEPCGVC
PSCHLFTQGSHPDFYPLSPELPEDGSSSRKLLQIKIDAVRAILEPLTQSSLRGGRRVVLI
NPAEMLNTQAANALLKILEEPPEAVVFLLVAHNRDRVLPTIKSRCRQLILPAPSFQAALQ
FVQAQNIENAENLLAFHSHAPLFPHAPEQDELRDKLLNVLIEPRLLAILDYAAEYDKAKL
PLADLLDWIAKWLIDLGLSQQKMSPLYYPQHASSLNKLAAKTNPATLFRFQAALNALAPY
GHHSLNVKMQAEDLLCEYLTLTQNKNR
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgatttacaactggcacacaaccgcgtggcaacacatcaccgcccattggcacacccca
gccaacgcatggctcatcatcggcaaacaaaacacaggcaaaatcgcctttgcccaacat
ttcgcccaagccctgctctgtgaaacgccgcaagcgcaacacgagccttgcggtgtctgc
ccatcgtgccatttatttacacaaggttcccaccctgatttttacccactttcgcctgaa
ttacccgaagatggcagcagttcacgcaaattattgcaaattaaaattgacgcagttcgc
gccattttagagccactcacacaatcgtccttgcgtggtgggcggcgcgtggtgctgatt
aatccagccgaaatgctcaacacgcaagccgccaacgccctactgaaaatcttggaagaa
ccgcccgaagccgttgtatttctgctggtcgcccacaaccgcgaccgtgttttgccgacc
atcaaaagccgttgccgccaactgattttgcctgcgcccagctttcaggctgccttacaa
tttgtgcaagcccaaaatattgaaaatgcagaaaatttactcgcctttcacagccacgcg
cccctattccctcacgcacccgaacaagacgaattgcgcgataaattattgaatgtatta
atagaacccagattgctcgccattttagattacgctgccgaatacgataaagccaaatta
ccactcgcagatttgctggactggatagccaaatggttgattgatttaggtttatcacaa
caaaaaatgtcgccgctttactatccgcaacatgcaagcagcctgaataaattagcggca
aaaaccaatcctgcgacactttttcgttttcaggctgccttaaacgcactagccccttac
ggacaccacagcttaaatgttaaaatgcaagccgaagatttattgtgtgaatatttaact
ttgacacaaaataaaaatcgctaa
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