Alysiella crassa: LVJ80_09850
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Entry
LVJ80_09850 CDS
T08264
Symbol
smc
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
acrs03036
]
LVJ80_09850 (smc)
Chromosome and associated proteins [BR:
acrs03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
LVJ80_09850 (smc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
SMC_hinge
AAA_29
ABC_tran
Rad17
Motif
Other DBs
NCBI-ProteinID:
UOP06126
LinkDB
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Position
72611..76078
Genome browser
AA seq
1155 aa
AA seq
DB search
MRLTHIKLAGFKSFTDPTTIHVPSQLVAVIGPNGCGKSNVIDAVRWVLGEASAKQLRGES
MQDVIFNGAATRRPAPRASVELVFDNSDHSLQGAWGQYGEIAIKRQLTRQGESSYFINNQ
SVRRRDITDLFLGTGVGARGYAVIEQGMITRIIEACPEELRAYIEEAAGVSKYKERRRET
ETRLKDTREHLQRLADLQTELARQVEKLEKQAATAAQYQELSAELTRLENLLNYVNWRNS
LAQADEAGAAHQAAQYQLEQFSEQHQEFTAQLEQLRETELSQQQQNHALNQEHSLLREQM
ARLEEQIRAQQNQQQRVERERLAAQAALQKIQQEQMVLQSEADLLENDLAEKQIELSELA
VLVAEHEAQLPELEDAQAAAQLVYQSQQDELNRLKRELALKQQQLKHTQESLNQALARQA
RLESEQAALNLPDDSELSIAQAQVDELKEKYGILETQLQEQETYSGSLKTRLHAAQESYH
AVYQHYLTAQAQHQALTQLLAEQPQQDFWAHTSASNAPVLWQNVVVPQDWQHAFGVVLAE
RLQARAVAEDFVLPDVLPQGSAAWTVSGSLKAKTQPAQALINQIQADKRFQAALQHWLDG
VLCAPNLAYALANQHELQNNQLWLTPEGHRVDKLSVVLFNESDKNQLVSQKMRLDNLTAE
LAELAPNLQLAEAELAHIRTENNSHEAQFRETQTAQRTQAAQLQAAQNRANELFARTNQG
QLRRAHIEQELAQLSEEIEHFTYSRDGLSDDVDTLAAAVSGFDVGNQAQDFQQQQNRVKQ
ARLALLESNRQYGLAEIALHKQQQRLENVQQQLAIAEQQKSEWLARQLDLALADETADDG
RSAELDTLTEMAAAVQEQIAEAVARLAQTQELARNVYAEQQRLAAQQPRLQDEVQATLLK
QQEFLINAKQFHQHLLDTHADLLVLEESAQHAGQPETMSRNIVKLNQQIAALGAVNLAAL
EELAEAAERDTYYRTQSDDVQAAIALLEEAIAQIDDETKIRFKETFDLVQKKVQEFFPTL
FGGGEASLRMEGDDWLTAGVSIMARPPGKKNSTIHLLSGGEKALTAMSLVFALFSLNPAP
FCLLDEVDAPLDDANTSRFCNLVKEMSAQTQFLYISHNRLTMEMADQLIGVTMQEKGVSR
IVAVDIQQALKMAES
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctaacccacattaaattagcaggtttcaaatcgtttaccgaccccaccaccatt
catgtgcctagccaattggttgccgtgattggtccaaacggctgcggcaaatccaatgtg
atagacgcagtgcgctgggtgttgggcgaagcgtccgccaaacaattgcgcggcgaatcc
atgcaagacgtgattttcaatggcgcagccacgcgccgccctgccccacgcgcttcggtg
gaattggtgtttgacaacagcgaccacagtttgcaaggcgcatgggggcaatacggcgaa
atcgccatcaaacgccaactcacacgacaaggcgaatccagttatttcattaataatcaa
tcagttcgccgccgcgatattaccgatttgtttttgggtacgggcgtgggggcacgtggc
tatgcggtgattgagcagggcatgattacgcggattattgaagcgtgtcccgaagaactc
cgcgcctatattgaagaagcggctggcgtgtccaaatacaaagaacgccgccgtgaaacc
gaaacgcgtttgaaagacacccgcgaacatttgcagcgtttggcggatttgcaaacggaa
ttggcgcgacaagtagaaaagctggaaaaacaagccgctaccgccgcacaatatcaggaa
ttaagcgcggaattaacacgtttggaaaatttgttgaattatgtgaattggcgcaattct
ttggcgcaagccgatgaagcgggcgcggcgcaccaagcggcacagtatcaattggaacaa
ttttcggaacaacatcaagaatttaccgcgcaattagaacagctccgcgaaacggaatta
tcacaacaacaacaaaatcatgcgttaaatcaagaacattctttgttgcgcgaacaaatg
gcgcgtttggaagagcaaattcgggcgcaacaaaatcagcaacagcgcgtggaacgcgag
cgtttggcggcgcaggctgccttgcaaaaaattcagcaagaacaaatggttttgcaaagt
gaagcggatttgctggaaaatgatttggcggaaaaacaaattgaattgagtgaattagcc
gttttggtggcggaacacgaagcgcaattgcccgaattggaagacgcgcaggctgccgcg
caactggtttaccaaagtcagcaagatgaattaaaccgtttgaaacgcgaattagccctg
aaacaacaacagcttaaacacacacaagaaagtttaaatcaggctttggcgcggcaagcg
cgtttggaaagtgaacaggcggcattgaatttgcccgatgacagtgaattgtccattgca
caagctcaagttgatgaattaaaagaaaaatatggcattttggaaacgcaattacaggag
caggaaacctattcaggcagcctgaaaacgcgtttgcacgcagcacaagaatcgtatcat
gctgtttatcaacactatttaaccgcgcaagcgcaacatcaggctttgacgcaattattg
gcggagcagccgcaacaggatttttgggcgcacacttctgccagcaacgcgcctgtgttg
tggcaaaacgtggtcgtgccgcaggattggcaacacgcgtttggggtggtgttggcggag
cgtttgcaggcgcgggcggtggcggaagattttgttttacctgatgttttgccgcagggc
agtgccgcgtggacggtttcaggcagcctgaaagcaaaaacgcaacccgcgcaagcatta
atcaatcaaattcaagcagataagcgttttcaggctgccttgcaacattggctggacggg
gtgttgtgtgcgccgaatttggcgtatgcgctggcaaatcaacatgaattgcaaaacaat
cagttatggctcacacccgaagggcatcgggtggacaaattaagcgtggttttgtttaat
gagtctgataaaaatcaattagttagccaaaaaatgcgtttggacaatttgacggcggaa
ttggcggaattagcccccaatttgcaattggcagaagcggaattggcgcacattcgcacg
gaaaataacagccacgaagcgcaatttcgtgaaacgcaaacggcgcagcgaacgcaggct
gcccaattgcaagcggcgcaaaatcgggcaaatgaattgtttgcgcgtaccaatcagggg
caattgcgccgcgctcatattgagcaggaattggcgcaattatctgaagaaattgaacat
tttacttatagccgcgatggtttgagcgatgatgtggacactttggcggcggcggtgtcg
ggttttgatgtgggcaatcaggcgcaggattttcagcagcaacaaaatcgggtaaaacaa
gcgcgtttggctttgctggagagcaatcggcaatatggtttggcggaaattgctttgcat
aaacaacaacaacgcttggaaaatgtgcagcagcaattggcaattgcggaacagcaaaaa
tcggaatggttggcgcggcaactggatttggcgttggcggacgaaacggcggacgatggg
cgcagcgcggaattggacacgctcacggaaatggcggcggcggtgcaagagcaaatcgcg
gaagcggtggcgcgtttagcgcaaacgcaggaattggcgcgaaatgtgtatgcggaacag
cagcgtttggcagcccaacagccgcgtttacaagacgaagtgcaagccactttattgaaa
caacaggaatttttaatcaacgccaaacagtttcatcaacatttattggacacgcacgcg
gatttattggttttggaagaatcggcgcaacacgctgggcagcctgaaaccatgtcgcgc
aatattgtgaaattaaatcaacaaattgcggctttgggtgcggtcaatttggcggcttta
gaagaattggcggaagcggcagaacgcgatacttattaccgcacgcaaagcgatgatgtg
caggctgccatcgctttattggaagaagccatcgcgcaaattgacgatgaaacgaaaatt
cgttttaaagaaacttttgatttggttcagaaaaaagttcaggaatttttcccgacttta
tttggtggtggcgaagccagtttgcgcatggaaggcgatgattggctgacggctggggtg
tccattatggcgcgtccccctggtaagaaaaacagcacgattcatttattgtcgggcggc
gaaaaggctttgacggcgatgagtttggtgtttgcgctgtttagtttgaatcctgcgccg
ttttgtttactggacgaagtggatgcgccacttgatgatgcgaataccagccgtttttgc
aatttggtcaaagagatgtcggcgcaaacgcaatttttgtatatttcgcacaatcgtttg
acgatggaaatggctgaccaattaattggcgtaaccatgcaggaaaaaggggtgtcgcgg
attgtggcggtggatattcagcaagcgttgaaaatggcagaaagttaa
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