Alysiella crassa: LVJ80_10870
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Entry
LVJ80_10870 CDS
T08264
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
acrs
Alysiella crassa
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acrs03009
]
LVJ80_10870 (rsmB)
Enzymes [BR:
acrs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
LVJ80_10870 (rsmB)
Ribosome biogenesis [BR:
acrs03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
LVJ80_10870 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
Methyltransf_25
FtsJ
Methyltransf_11
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
UOP06291
LinkDB
All DBs
Position
2699871..2701127
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AA seq
418 aa
AA seq
DB search
MSLSQVQTLATQTLLAVESGKNLSDELANIIAQHPDLTAQDKGMLQDIAYGCQRFAGSLK
FMLGKLLNKPIDNKQLEYYFLVAIYQLNHTRNAPHAVVNEAVNNIAKIGRGQYRSFANAI
LRRFLREQEGLNKACKFDDVAKHNLPIWLQKVLQNQYPKHWHNMVTAFQSHPPLTLRVNR
RHMNAEHYLSVLQEHDIAAKILDDYAIRLAEPMPVHQLPKFAEGVVSVQDFGAQQAGYLL
NPQNGERILDACAAPGGKTGHILELADCEVTALDIDNKRLMRVADNLARLNVQAALHCAP
AENLDEWWDGKPFDAILADVPCTASGTIKRNPDIKWLRRPTDALKTAKQQEAMLDELWKT
LKSGGRMLLATCSIFTEENSMQCEKFLRRHPDAELKQEQTLIPNEKQDGFYYALIIKK
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgtccctatcccaagtgcaaaccctagccacgcaaacgctgttggcggtggaaagcggc
aaaaatttgtccgatgaattggcgaatatcatcgcgcaacaccctgatttaaccgcacaa
gacaaaggcatgttgcaagatattgcctatggttgccagcgttttgcaggcagcctgaaa
tttatgttgggcaaattattgaataaaccgattgataataagcagttggaatattatttt
ttggtggcgatttatcaattaaatcatacgcgtaacgcgccgcatgcggtggtaaacgaa
gcggtgaacaatattgccaaaatcgggcgtgggcaatatcgctcgtttgccaatgcgatt
ttgcgccgctttttgcgcgaacaagaaggtttgaataaggcatgtaaatttgacgatgtg
gcgaaacacaatttgcccatttggttgcaaaaagtattacaaaatcaatatcctaaacat
tggcacaatatggttaccgcgtttcagtcgcacccgccgctcactttgcgcgtgaaccgc
cgccacatgaacgcggaacactatttgtctgtgctgcaagagcatgatattgcagcaaaa
attttggacgattatgccattcggctcgccgaacccatgcccgtgcatcagttgccaaaa
tttgccgaaggcgtggtttcggtgcaagattttggggcgcagcaagcagggtatttgctc
aatccgcaaaacggcgagcgtatcttggacgcgtgcgccgcccctggggggaaaacgggg
catattttggagttggcggattgcgaagttaccgctttggatattgataacaagcgttta
atgcgtgtggcggacaatttggcacggctgaatgtgcaggctgccttgcattgtgcgcct
gcggaaaaccttgacgaatggtgggacggcaagccttttgacgcgattttggcggacgtg
ccgtgtaccgcttcgggaaccatcaagcgcaatcccgatattaaatggttgcgccgcccc
acagacgcgctgaaaacggcaaaacaacaagaagccatgttggacgaattgtggaaaacg
cttaaatcaggcgggcgcatgttgttggcaacttgctccattttcacggaagaaaacagt
atgcaatgcgaaaaattcttgcgccgccacccagacgcagaattgaaacaagagcaaacc
ttaatccccaatgaaaaacaagatggcttctattacgcattgattatcaaaaaataa
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