Alysiella crassa: LVJ80_15505
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Entry
LVJ80_15505 CDS
T08264
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
acrs
Alysiella crassa
Pathway
acrs03030
DNA replication
acrs03430
Mismatch repair
acrs03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acrs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVJ80_15505 (dnaE)
03430 Mismatch repair
LVJ80_15505 (dnaE)
03440 Homologous recombination
LVJ80_15505 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acrs03032
]
LVJ80_15505 (dnaE)
03400 DNA repair and recombination proteins [BR:
acrs03400
]
LVJ80_15505 (dnaE)
Enzymes [BR:
acrs01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVJ80_15505 (dnaE)
DNA replication proteins [BR:
acrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVJ80_15505 (dnaE)
DNA repair and recombination proteins [BR:
acrs03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVJ80_15505 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
XHH48625
LinkDB
All DBs
Position
complement(1761989..1765444)
Genome browser
AA seq
1151 aa
AA seq
DB search
MPLPTYIPLRAHSEFSITDGTIRVKDLAKTAAKFGYPALGLTDLMNTFGLIKFYKACQSV
GVKPIMGADIRIHNASKPEHAHRALLLIRNGAGYTRLSELLTAAHTQQRGNHPPEIHPDW
LANGDNSGLICLSGAHLGAVGSALMLGHAEQAKTIAQQYAAWFPNAFYLELQRLPEKPEW
EQVVSGSLKLATELDLPVVATHPAQFLESGDFLAHDTRVCIAQGWTLTDPKRPREFTASQ
YFIEPEEMAARFADIPEALANSVEIAKRCSETLTLGKNFLPDFPTPNGMNLNDYIVHLSN
LGLQERLANLYPDEAERVRRLPEYQERLDFELKIIVQMGFAGYFLIVQDFINWAKQNGCP
VGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDIDFCQANRGRVIEY
VREKYGKDAVSQIVTFGTLSSKAVIRDVGRVLQLPFTLCDRLSKLVPLVANKPLHLQDAI
AAEPEIMQIVQDEEADELIHLALKLEDLTRNLGMHAGGVLIAPGKISDFCGVYQADEHAA
PVSMYDKGDVEDIGLVKFDFLGLRNLTIIEMAQHFIKQTTGKTIDVNDVNCAPLDDKKAY
KIFQDANTTAVFQFESSGMKKMLSQAKTTNLEEIIAFVSLYRPGPMDLIPDFIARMKGAK
FEYMHPLLEPVLEPTYGIMVYQEQVMQAAQVIGGYSLGGADLLRRAMGKKKPEEMAKHRE
TFAEGAAKQDISREKADEIFDYMEKFAGYGFNKSHAAAYAYVSFQTAWLKAHYPAEFMAA
TMSSELDNTDQLKIFFDDARHPLNGIQFLPPDVNESFYRFIPNANKQIRYALGAIKGTGE
AAVNAMVAARESGGKFKSLFDFCERVGKHHANRRVLEALIKGGAFDSIEPNRAMLFANID
LALQHADQKAENANQGGLFDMLDDVIDDIQMQPAPAWSDTQKLAEEKTAIGFYLSQHPFE
PYRSEVRQIARTTLLNLRPSQNEQRVAGFVTQVRTIMGKNGKFVAITLEDDTAAREVVVR
GEVLDNLPKETLKADQVLVCECRVSEDHFNGGNGLRLNANAVYTLNEARAAYARGLTLFI
TPQVDVAKLAEILRPNCTPEWGRRVGIKLEYENEMARGTLLAGAKWRVGISAQLLAELEM
VLGQYGLRVDW
NT seq
3456 nt
NT seq
+upstream
nt +downstream
nt
atgcccctacccacttacattcccctacgcgcccattcggaattttccatcacagacggc
accattcgcgtgaaagatttggcgaaaaccgccgcgaaatttggctatcccgcgcttggt
ttaacggatttaatgaatacatttggtttaatcaaattttacaaagcctgccaaagcgtg
ggcgtgaaacccattatgggcgcagacattcgcattcacaatgcgagtaaacccgaacac
gctcatcgcgccctgttgctgattcgcaacggcgcaggttacacgcgtttgagcgaattg
ctcaccgccgcccacacgcaacaacgcggcaatcacccccccgaaatccaccccgattgg
ctggcaaatggcgacaattcgggtttaatttgcctgtcgggggcgcacttgggcgcggta
ggcagcgcactcatgctgggacacgccgagcaagcgaaaaccatcgcgcaacaatatgcg
gcttggtttcccaatgcgttttatttggaattgcagcgtttacccgaaaaacctgaatgg
gaacaagtggtttcaggcagcctgaaattggcgacggaattggatttgcctgtagtggca
acccaccccgcgcaatttttggaatcaggcgattttctcgcccacgacacccgcgtgtgt
atcgcgcaaggctggacactcaccgacccgaaacgcccacgcgaattcaccgccagccaa
tattttattgagcccgaagaaatggcggcgcgttttgccgacattcccgaagcactcgcc
aatagcgtggaaatcgccaagcgttgcagcgaaacgctgacgctgggcaaaaatttcttg
cccgatttccccacgcccaatggtatgaatttaaacgactatattgtccatttgtctaat
ttgggtttacaagaacgcttggcgaatttgtatcccgatgaagcagaacgcgtgcgcagg
ctgcctgaatatcaagaacggctggattttgaattaaaaatcattgtgcaaatgggtttt
gctggctattttttgattgtgcaagactttatcaattgggcaaaacaaaacggctgtccc
gtagggccgggacgcggttcgggcgcgggttctctggttgcctattctttgaaaatcacg
gatttagacccgctcaaatacgcgctgctgtttgaacgctttttgaatccagaacgcgtg
tccatgcccgactttgacattgacttttgccaagccaatcgtggacgcgtgattgaatat
gtgcgcgaaaaatacggcaaagacgcggtcagccaaattgttacctttggtactttatcg
tctaaagccgtgattcgtgatgtggggcgcgtgttgcaattgccgtttaccctgtgcgac
cgtttgtccaaactcgtgcctttggtggcgaacaagcctttgcatttgcaagacgcgatt
gcggctgaacccgaaatcatgcaaatcgtccaagatgaagaagcggacgagttaattcat
ttagctttgaaattagaagatttaacgcgcaatttgggcatgcacgcgggcggcgtattg
attgcccctgggaaaatttccgatttttgcggcgtgtatcaagcggacgaacacgccgcg
cccgtgtccatgtacgacaagggcgatgtggaagacattggtttggtgaaatttgacttt
ttgggtttgcgaaatttgaccattattgaaatggcgcaacatttcatcaaacaaaccaca
ggcaaaaccatagacgtgaacgatgtcaattgcgcccctttggacgacaaaaaagcctac
aaaattttccaagacgcaaacaccaccgccgtcttccaatttgagtctagcggcatgaaa
aaaatgttgtcgcaagcgaaaaccacgaatttggaagaaatcattgcttttgtgtcgctg
tatcgccccggcccgatggatttgattccagactttattgcgcgtatgaaaggggcgaaa
tttgaatacatgcaccctttgctggagcctgtgttggagccaacttacggcattatggtg
taccaagaacaggtaatgcaggctgcccaagtgattggcggttattctttgggtggggcg
gatttgttgcgccgcgccatgggtaagaaaaaacccgaagaaatggcaaaacaccgcgaa
acctttgccgaaggcgcagccaaacaagacatcagccgcgaaaaagccgatgaaattttt
gattatatggaaaaattcgcaggctacggtttcaataaatcccacgcggcggcgtatgcc
tatgtgtcgtttcagactgcgtggttgaaagcgcattatcccgccgaatttatggcggca
accatgtccagcgaattagacaacaccgaccaattaaaaatcttttttgatgacgcgcgc
cacccactcaacggcattcaatttctgccgcccgatgtgaatgaatcgttctaccgcttt
attccgaatgcgaataagcaaatccgctacgcactcggtgcaattaaaggcacaggcgaa
gcggcggtaaacgcgatggtggcggcacgcgaatcaggtggcaaattcaaaagcctgttt
gatttttgtgaacgcgtgggcaaacaccacgccaatcgccgcgttttggaagccctgatt
aaaggcggcgcgtttgacagcattgagccaaatcgcgccatgttgtttgccaatattgat
ttggctttgcaacacgccgaccaaaaagcggaaaacgccaatcaaggcggcttatttgat
atgctggacgatgtgattgacgatattcaaatgcagcctgcacccgcgtggagcgacacg
caaaaattagctgaagaaaaaaccgccatcggcttttatttgagccagcacccatttgaa
ccatatcgcagtgaagtgcgccaaatcgcacgcaccacattattgaatttgcgccccagt
caaaatgagcaaagggtggcaggttttgttacccaagttcgcacaattatgggtaaaaat
ggcaaatttgttgccatcacattggaagacgacacggcggcgcgtgaagtggtggtgcgt
ggcgaagtattggacaatttgcccaaagaaactttgaaagccgaccaagttttggtctgc
gaatgccgcgtatcggaagaccattttaatggcggcaatggtttgcgtttgaatgcgaat
gcggtttatacgctgaatgaagcgcgagcggcttatgcgcgtggtttgactttgtttatc
acgccgcaagtggacgtggcaaaattggcggaaatcctgcgccccaattgcacgcctgaa
tggggacggcgcgtgggcatcaaattggaatatgaaaatgagatggctcggggaacttta
ttggcgggcgcaaaatggcgcgtgggcatatcggcgcaattattggcggaattggaaatg
gtgttggggcaatatggtttgcgggtggattggtga
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