Aerophototrophica crusticola: HHL28_08540
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Entry
HHL28_08540 CDS
T10567
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acru Aerophototrophica crusticola
Brite
KEGG Orthology (KO) [BR:
acru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acru03032
]
HHL28_08540 (topA)
03400 DNA repair and recombination proteins [BR:
acru03400
]
HHL28_08540 (topA)
Enzymes [BR:
acru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HHL28_08540 (topA)
DNA replication proteins [BR:
acru03032
]
Prokaryotic type
DNA Topoisomerases
HHL28_08540 (topA)
DNA repair and recombination proteins [BR:
acru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HHL28_08540 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
QJE73124
UniProt:
A0A858R6Y9
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All DBs
Position
1735915..1738602
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AA seq
895 aa
AA seq
DB search
MAGSSVLIVESPAKAKTINKYLGSDFTVLASFGHVRDLPPKDGSVRPEEDFAMEWELGDR
SKRHVDEIARAVRGAQKVYLATDPDREGEAIAWHVKELLAERKLLGKADVKRVTFNEITK
SAVQEAIRKPRDVDQELVQAYLARRALDYLVGFTLSPVLWRKLPGSKSAGRVQSVALRLV
CEREAEIEAFRPQEYWTIEAEFKTHAGQSFTARLTQLDGKRLEKFSLGDKGAAEAALARI
RPMLFKVGRVERKEVRRNPYAPFTTSTLQQEASRKLGFGAMKTMRTAQKLYEGVDIGGET
VGLITYMRTDGVSLSQEAIDGARRLIDSTWGDSYVPEKPRIYKSAAKNAQEAHEAIRPTD
LFRRPEDVARYLDKDELRLYELVWKRTVASQMASAILDQVTVDIMSKGAEAVFRATGSVI
RFDGFLKVYQEDRDDDGDEDEGNRRLPAMKDGDDLTRGALKSEQHFTQPPPRYSEASLVK
RLEELGIGRPSTYASILQVLQDREYVRLDKRRFVPEDRGRLVTTFLESFFPRYVQYDFTA
GLEEKLDDISGGRVFWKDVLREFWFNFSKAVEGTKDLTITQVLDALDAALGPHFFPQVTG
PDGKVVDTRVCPNCHQGRLGLKLGKTGAFIGCSRYPDCKYTRPLAVAGEEGEQAEGDRDL
GTDPETGLQVQMKRGPYGVYVQLGAAASKEDKPKRVSLPRGLNPADVDLDIALRLLALPR
SLGTHPSSGQEILAGIGRFGPYLKHGDAYKNLTADDDVLTIGLNRAVVLLGDGPVKKAVQ
GRELGPHPKDGKPISVGSGRFGPYVKHLKLFASIPKSMNADEITLPQAVELLAAKAAKDS
GKAPAPAAAETEKAPAKKAAPAKKAPAKAAGTKSATKSTAAKAPAKRAAAKKVTA
NT seq
2688 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcagcagcgtcctcatcgtcgagtccccggccaaggccaagacgatcaacaag
tatctcggctccgacttcaccgtcctggcgagcttcggccatgtgcgggacctgccgccc
aaggacgggtccgtgcggccggaagaggatttcgccatggagtgggagctgggcgaccgc
tccaagcgccatgtggacgagatcgcccgggccgtgcgcggcgcgcagaaagtctacctg
gccaccgacccggaccgggagggggaggccatcgcctggcacgtgaaggaactgctggcc
gagcgcaagctgctgggcaaggcggacgtcaagcgcgtcaccttcaacgagatcaccaag
tccgcggtgcaggaggccatccgcaagccccgcgacgtggaccaggagctggtgcaggcc
tacctggcccggcgcgccctggactatctggtgggcttcaccctgtcgccggtgctgtgg
cgcaagctgccggggtccaagtccgccggccgggtgcagtcggtcgccctgcggctggtc
tgtgagcgcgaggcggagatcgaggcgttccgcccgcaggaatactggaccatcgaggcg
gagttcaagacccacgccggccagtccttcaccgcgcgcctgacccagctggacggcaag
cggctggagaagttcagcctgggcgacaagggggcggccgaggcggcgctggcccgcatc
cgccccatgctgtttaaggtcggccgggtggagcgcaaggaggtgcggcgcaacccctac
gcccccttcaccaccagcaccttgcagcaggaagccagccgcaagctgggcttcggcgcc
atgaagaccatgcgcacggcccagaagctgtatgagggtgtggatatcggcggggagacc
gtcggcctgatcacctatatgcgtacggacggcgtctccctgagccaggaggccatcgac
ggggcgcggcggctgatcgacagcacctggggcgacagttacgtcccggagaagccgcgc
atctacaagtctgccgccaagaacgcgcaggaggcccacgaggcgatccgccccaccgac
ctgttccgccggcccgaggacgtggcccggtacctggacaaggacgagttgcggctttac
gagctggtctggaagcgcaccgtggccagccagatggccagtgccatcctggaccaggtc
accgtcgacatcatgagcaagggtgccgaggcggtgttccgcgccaccggcagcgtcatc
cgcttcgacggcttcctgaaggtctaccaggaggaccgggacgacgacggcgacgaggac
gagggcaaccgccgcttgcccgccatgaaggacggcgacgacctgacccgcggcgccctg
aagagcgagcagcacttcacccagccgccgccccgctactccgaggccagcctggtgaag
cggctggaggagctgggcatcggccggccgtccacctatgcgtccatcttgcaggtgctc
caggaccgggaatatgtccggctggacaagcggcgcttcgtgccggaggaccggggccgg
ctggtcaccaccttcctggagagcttcttcccccgctatgtgcagtacgacttcacggcg
ggtctggaggagaagctggacgacatctccggcgggcgcgtcttctggaaggacgtgctg
cgggagttctggttcaacttctccaaggcggtggaggggaccaaggacctgaccatcacc
caggtgctggacgcgctggacgccgcgctgggcccccacttcttcccccaggtcaccggg
ccggacggcaaggtggtggacacccgcgtctgccccaactgccaccagggccggctgggg
ctgaagctgggcaagacgggggccttcatcggctgttcccgctaccccgactgcaagtac
acccgccccctggccgtggccggggaggaaggggagcaggcggagggcgaccgcgacctc
ggcaccgacccggagacgggcctgcaggtgcagatgaagcgcgggccctatggcgtctat
gtgcagcttggtgccgccgcgtcgaaggaagacaagcccaagcgcgtgtccctgccccgc
gggctgaacccggcggacgtggacctggacattgccttgcggctgttggccctgccccgc
tcgttgggcacgcaccccagctcgggccaggagatcctggcgggcatcggccggttcggg
ccgtacctgaagcatggcgacgcctacaagaacctgaccgccgacgacgacgtgctgact
atcggcctgaaccgggccgtggtgctgctgggcgacgggccggtgaagaaggcggtgcag
gggcgcgagctggggccgcatcccaaggacggcaagccgatcagcgtcggctccggccgg
ttcgggccctatgtcaagcacctgaagctgttcgccagcatcccgaaatccatgaacgcg
gacgagatcaccctgccgcaggcggtggagctgctggcggccaaggcggccaaggactcg
ggcaaggcccctgcccccgctgcggccgagacggagaaggccccggcgaagaaggcggcc
cctgccaagaaggccccggcgaaggcggcggggaccaagtccgcaaccaaatccacggct
gccaaggcacccgcaaagcgtgcggcggcgaagaaagtgacggcctga
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