Aerophototrophica crusticola: HHL28_08565
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Entry
HHL28_08565 CDS
T10567
Name
(GenBank) PAS domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
acru Aerophototrophica crusticola
Pathway
acru03030
DNA replication
acru03430
Mismatch repair
acru03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
acru00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HHL28_08565
03430 Mismatch repair
HHL28_08565
03440 Homologous recombination
HHL28_08565
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acru03032
]
HHL28_08565
03400 DNA repair and recombination proteins [BR:
acru03400
]
HHL28_08565
Enzymes [BR:
acru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HHL28_08565
DNA replication proteins [BR:
acru03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HHL28_08565
DNA repair and recombination proteins [BR:
acru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HHL28_08565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
PAS
HisKA
DNA_pol_A_exo1
RNase_H_2
PAS_4
DEDDh_C
PAS_7
PAS_9
Motif
Other DBs
NCBI-ProteinID:
QJE73129
UniProt:
A0A858R6F5
LinkDB
All DBs
Position
1742336..1744420
Genome browser
AA seq
694 aa
AA seq
DB search
MDAARLGRVALFIALGAAALCLSLPWVVRGSPDPVLTMAFVSAAVAGIAVALVWGLVRLG
VINPGKRLAAQVPVLLMSDGKGGLPPENYGAIGPLAALVAELAAKVAALKADTDRTVAEA
TRRAEEQSGRLAALLRDLHQGVLVCNLRHQVLLYNEEARALLPQAAALGLGRPLVELVTA
EPVRHTLDRLTRRIAEGRHKEHRDGTTAGFVAGTAEGRLLQGRMAAILGTDESVTGYVVT
LEDATEEMASLAARDRLLRSATEDVRGPLANLSAAAEMLAEHPELSPEERQGFEQVILAG
SGQLQDTLARITTEYRAGITAAWPMADIISGNLFALVAERCARQGGPALTCTGLPCWLHG
DSYGLALLLSRLAQRVAEATGQRELDIAATHDDRFVYADLCWKGEPLAAASVEGWRADSL
ADALAALTVADILDYHNADLWSERCGEGLSRLRVPLPLPKEPHGRRKAAPAPRPEFFDFD
LLHQPLPEDALARMPLKTLSYVVFDTETTGLSPSQGDELVSVAGVRIVNGRILTGETFQS
LVNPGRAIPAASTAIHGITDAMVADAPPPEQVLKQFRAFVGGAVLVAHNAAFDLKFLKMK
QKAAGVKFDTPVLDTMVLSRQLQGEDGTHSLDGIAASLGVEVVDRHSALGDSLVTAAIFL
RFLDALAAQGIVTLDDAIRRSNMAVELHARERAF
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggacgcggcccggctggggcgggtcgccctgttcatcgcgttgggcgccgcggccttg
tgcctttccctgccctgggtggtgcgggggtcgccggacccggttctgaccatggccttc
gtctctgccgccgtggcggggatcgccgtggcgctggtctgggggctggtacggctgggg
gtcatcaatcccggcaaacgcctggcggcccaggtgccggtgctgctgatgagcgacggc
aagggcgggctgccgccggagaactatggggccatcggccccctggccgccctggtggcg
gagctggcggctaaggtggcggccctgaaggcggacaccgaccgcaccgtggcggaggcg
acccggcgggcggaggaacagtccggccggctggcggccctgctgcgggacctgcaccag
ggtgtcctggtctgcaacctgcgccaccaggtgctgctatacaatgaggaggcgcgggcg
ctgctgccccaggccgccgccctgggcctgggccggccgctggtggagctggtgacggcg
gagccggtgcggcacaccctggaccggctgacccggcgcatcgccgagggccggcacaag
gagcaccgggatggcaccaccgccggcttcgtggccggcacggcggaggggcggctgctg
caagggcggatggccgccatcctgggcaccgacgagtcggtcaccggctatgtggtgacc
ctggaggacgcgacggaggagatggcgtccctggccgcccgcgaccggctgctgcgcagc
gccacggaggatgtgcgcggccccctggcgaacctgtccgccgcggcggagatgttggcg
gagcacccggagctgtcgccggaagagcggcagggcttcgagcaggtgatcctggccggg
tccgggcagttgcaggacaccctggcccgcatcacgacggagtaccgtgccggcatcacc
gccgcctggcccatggctgacatcatttccggcaacctgttcgccctggtggcggagcgc
tgcgcccgccagggggggccggccctgacctgcaccggcctgccctgctggctgcatggg
gacagctacggcctggcactgctgctgtcccggctggcccagcgggtggcggaggcgaca
gggcagcgggagctggacatcgccgccacccatgacgaccgcttcgtctatgccgacctc
tgctggaagggggagccgctggcggcggcatcggtggagggctggcgggccgacagcctg
gccgacgctttggccgccctgaccgtggcggacatcctggattaccacaacgcggacctg
tggtcggagcgctgtggcgaggggttgtcccggctccgggtgcccctgcccctgcccaag
gagccccacggccgccgcaaggccgccccggcgccgcggccggagtttttcgacttcgac
ctgctgcaccagcccctgcccgaggacgcgctggccaggatgccgttgaagaccctgtcc
tatgtggtcttcgacacggagacgacgggcctgtcccccagccagggggacgagctggtg
tccgtggccggggtgcgcatcgtcaatggccgcatcctgacgggggagaccttccagagc
ctggtcaaccccggccgcgccatccccgcggccagcaccgccatccacggcatcaccgat
gccatggtggccgacgcgccgccgccggaacaggtgttgaagcagttccgcgcctttgtc
ggcggggccgtgctggtggcgcacaacgcggccttcgacctgaaattcctgaagatgaag
cagaaggcggcgggggtgaaattcgacacgcccgtgctggacaccatggtcctgtcccgg
caactccagggggaggacgggacacacagccttgacggcatcgccgccagcctgggggtg
gaggtggtggaccgccactccgccctgggggacagcctggtcaccgcggccatcttcctg
aggttcctggacgccctggcggcccaggggatcgtcaccctggatgacgccatccgccgg
tccaacatggcggtggagctgcacgcgcgggagcgcgccttctga
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