Aerophototrophica crusticola: HHL28_11150
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Entry
HHL28_11150 CDS
T10567
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
acru Aerophototrophica crusticola
Brite
KEGG Orthology (KO) [BR:
acru00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acru03032
]
HHL28_11150
03400 DNA repair and recombination proteins [BR:
acru03400
]
HHL28_11150
Enzymes [BR:
acru01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HHL28_11150
DNA replication proteins [BR:
acru03032
]
Prokaryotic type
DNA Topoisomerases
HHL28_11150
DNA repair and recombination proteins [BR:
acru03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HHL28_11150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CFAP107
Motif
Other DBs
NCBI-ProteinID:
QJE73568
UniProt:
A0A858R840
LinkDB
All DBs
Position
complement(2286042..2287133)
Genome browser
AA seq
363 aa
AA seq
DB search
MDGSTIDRDIIAEAQASAEAADLRYVNDDEPGIRRRKSGKGFTYKGPGGQTVKDPDTLAR
IRALAIPPAYTDVWICPDPDGHIQATGRDAKGRKQYRYHPRWMQVRDADKFERLMAFSRA
LPEIRARVDADMRLPGLPREKVLACVVKLLDTTLIRIGNDTYAKENKSFGLTTLRDRHVK
VEGSAVRFSFKGKSGKDWDLKLTDRRLAKLVKACQEVPGQRLFQFLEADGSRHYVTSQDV
NAYIREVAGADFSAKDFRTWAGTVLAAFALHEMERVDSQAARKRNLTSAIRKVSSRLGNT
PTVCRKCYVHPQVMDAYLEGSVVEQVQAEVRRELCHDLSGLTPEEVAVLAFLERRLGEEV
KQA
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
ttggacggcagcaccatcgaccgggatatcatcgccgaagcccaggcctcggccgaagcg
gcggacctgcggtacgtgaatgatgacgagcccggcatccgccgccggaagtcgggcaag
gggttcacctacaagggtccgggcgggcagacggtcaaggaccccgacaccctggcccgc
atccgggcactggccatcccgcccgcctataccgacgtctggatctgccccgacccggac
ggccacatccaggccacgggccgtgacgccaagggccgcaagcagtaccgctaccacccc
cgctggatgcaggtgcgcgacgccgacaagttcgagcggctgatggctttttcccgcgcc
ctgccggaaatccgggcccgggtcgacgcggacatgcgccttcccggcctgcccagggaa
aaggtgctggcctgcgtggtgaagctgctggacaccaccctgatccgcatcggcaacgac
acctacgccaaggagaacaagagcttcggcctgaccaccctgcgcgaccgccacgtcaag
gtggagggcagcgcggtccgcttcagcttcaagggcaagagcggcaaggactgggacctg
aagctcaccgaccgccgcctggccaagctggtaaaagcctgccaggaggtgcccggccag
cgcctgttccagttcctggaagccgacggcagccgccactacgtcacctcccaggacgtc
aacgcctatatccgggaggttgcgggcgccgacttcagcgccaaggatttccgcacctgg
gccggcacggtcctggccgccttcgctctccacgagatggagcgggtggacagccaggcc
gcccgcaagcgcaacctgaccagcgccatccgcaaggtctccagccgcctgggcaacacc
cccaccgtctgccgcaaatgctacgtccacccccaggtcatggacgcctacctggaaggc
agcgtggtggagcaggtccaggccgaggtgcgccgggaactgtgccacgacctctccggc
ctgaccccggaagaggtggccgtcctggccttcctggaacggcggttgggggaggaggtg
aagcaggcgtga
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