Aerophototrophica crusticola: HHL28_11435
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Entry
HHL28_11435 CDS
T10567
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
acru Aerophototrophica crusticola
Pathway
acru03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
acru00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HHL28_11435
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
acru03021
]
HHL28_11435
03400 DNA repair and recombination proteins [BR:
acru03400
]
HHL28_11435
Enzymes [BR:
acru01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HHL28_11435
Transcription machinery [BR:
acru03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HHL28_11435
DNA repair and recombination proteins [BR:
acru03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HHL28_11435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
IDH
Motif
Other DBs
NCBI-ProteinID:
QJE73619
UniProt:
A0A858R7R6
LinkDB
All DBs
Position
complement(2345773..2346789)
Genome browser
AA seq
338 aa
AA seq
DB search
MIQKNWQALEKPNKLDITPGDNSRREATIVAGPLERGFGLTLGNALRRVLLSSLQGAAVT
AIHIDGVLHEFSSIPGVREDVTDIVLNIKAMALKMGAEGPRRMRLRAEGPCEVTAGMIET
GADIEVLDPDHLICTLDAGARLNMELTVHSGKGYVPASQNRPEDAPIGLIPVDAIYSPVR
KVAYKVENTRVGQTTDYDKLSLNVETNGAVTPEDAVAIAARILQDQLQMFINFEEPQAAV
AETKADEIPFNKNLLRKVDELELSVRSANCLKNDNIVYIGDLVQKTEAEMLRTPNFGRKS
LNEIKEVLAQMGLHLGMEIPNWPPENIEELAKRLEEPY
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
ttgatccagaagaactggcaggcgctcgagaagcccaacaagctcgacatcactcccggc
gacaattcgcggcgtgaggcgaccatcgtcgccggcccgttggagcgcggcttcggcctg
acgctcggcaacgccctgcgccgcgtgctgctgtcctccctgcagggtgccgccgtcacc
gccatccacatcgacggcgtgctgcacgaattctcctccatccccggcgtccgtgaggac
gtgaccgacatcgtcctgaacatcaaggcgatggcgctgaagatgggggccgagggcccg
cgccgcatgcggctgcgcgccgagggcccctgcgaggtcaccgccggcatgatcgaaacc
ggcgccgacatcgaggttctggaccccgaccacctgatctgcaccctggacgccggcgct
cggctgaacatggagctgacggtccatagcgggaagggctacgtcccggccagccagaac
cggcccgaggatgcccccatcggccttatcccggtggacgccatctacagcccggtgcgc
aaggtcgcctacaaggtggagaacacccgcgtcggccagaccaccgactatgacaagctg
tccctgaacgtggagaccaacggcgcggtcaccccggaggacgcggtggccatcgccgcc
cgcatcctgcaggaccagctgcagatgttcatcaacttcgaggagccgcaggccgcggtc
gcggagacgaaggcggacgagatccccttcaacaagaacctgctgcgcaaggtggacgag
ctggagctgtccgtccgttccgccaactgcctgaagaacgacaacatcgtctatatcggc
gacctggtgcagaagacggaggcggagatgctccgtaccccgaacttcggccgcaagtcc
ttgaacgagatcaaggaagtgctggcgcagatgggcctgcacctcgggatggagattccg
aactggccgccggagaacatcgaggagctggcgaagcgcctcgaggagccgtactga
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