Crystallibacter crystallopoietes: AC20117_00450
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Entry
AC20117_00450 CDS
T05322
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
acry
Crystallibacter crystallopoietes
Pathway
acry03420
Nucleotide excision repair
acry03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AC20117_00450
03430 Mismatch repair
AC20117_00450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acry03400
]
AC20117_00450
Enzymes [BR:
acry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AC20117_00450
DNA repair and recombination proteins [BR:
acry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AC20117_00450
MMR (mismatch excision repair)
Other MMR factors
AC20117_00450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
PhoH
TraY
Motif
Other DBs
NCBI-ProteinID:
AUI49503
UniProt:
A0A1H1FF55
LinkDB
All DBs
Position
complement(98246..101614)
Genome browser
AA seq
1122 aa
AA seq
DB search
MSIGQVLTTYAPDELARMLGQHLPTPEQADIISSPLQPLLVIAGAGSGKTATMADRVVWL
VANGMVRPEEILGVTFTRKAAGELAARIRVQLNKLARHGLLPEGADDAAGLLEPKVSTYH
SYANGLVSDYGLRLGIERDVVLLGSAQSWQLASQVVEAYDGDIGHLTAAKSTLVKAVMQF
ASECSEHLATPEEAIGFLQDDVERISSLPYVEGSTRQPKAAVVSLLNRLRTRITVAELAA
QYGRAKRERGVLDYGDLVSLAAAIAKDVPQARELERLRYKVVLLDEFQDTSHAQMVLFSQ
LFGDGHPVTAVGDPNQSIYGFRGASAGQLFAFRQHFPLVDEDGQRSVAPASFLTVAWRNA
INVLAMANTISSPLNRVDPNRPKPGRLEVPALRPRPNAVEGTVVLSRYRSESEEAEQVAA
GVARARRTVFERDPETGRAEPVTTAVLCRRRAQIAGVAKALADKGIPYEIVGLAGLLSQP
EIIDLVATLRVLADPGRSDSLMRLLAGARWRIGPADLMAFADWSRFLESQRRRAAEDRQT
VDLDADEQASPLVVQQDLAEAASLVEALDRLPKPGWTSRNGRSLTPEALARLERLSAEVR
QLRTFVGDELPLLLGEVERAMLLDIEVASKPGVTIHQARRHLDAFHDAAATFMQTAQRVD
LLAFLAWLEAAAAEEGGLDVVQVDVSKDAVQLLTVHASKGLEWDAVFVPGLNDGAFPSGS
DNRWSSGNEALPWPLRGDGADLPQWDTEQPDQLSWFTAEEVYKGEVQAHNEQEERRLAYV
AYTRAKHLLVCSSAGWAGSKVKPCAPSIFLTELAELAQQDPSTVQVSTWISDEELGDTNP
FREETETAFWPYDPLEGPLVYRGGEPEPARPGRRAAMEAASQTVLQAIAEDRKLEQGAPW
ARETELLLQEHNASRGANEIELPAHISASMLVELKDNPGEVTRSLRRPVPRRPGIAARKG
TAFHSWVEEHFGTAGMLDLDDLSSPADSHVDQAYDLETMKATFKASEWAEKAPAAIEVPV
ETRVDEVVVRGRIDAVFRDQDGIWDLVDWKTGSPPSPDKLGIRAVQLAVYRLAWARLQGI
DPAEVKAAFYYVAADKTVRPHDLAGEAELEAIVRAAYAGSER
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
gtgagcatcggacaggtcctcacaacctacgccccggatgaacttgcccggatgctgggc
cagcatctgcccacccccgagcaggcggacatcatcagttcgccgctgcagccgctcctc
gtcattgccggcgcgggctcgggcaaaacggccacgatggcggaccgcgtggtgtggctg
gtagccaacgggatggtccggccggaggagatcctcggtgttactttcacccggaaggcg
gcaggcgagctggcggcgcggatccgcgtccagctcaacaagctcgcccgccacgggctg
ctgccggagggcgcggatgacgcggccgggctgctggagcccaaggtgtccacctaccac
tcgtacgccaacggtctggtttccgactacgggctccggctcggcatcgaacgcgacgtc
gtgctgctgggcagtgcccagtcgtggcagcttgccagccaggtggtggaggcttatgac
ggggatatcggccatttgacggcggccaagtccacgctggtcaaggcggtcatgcagttc
gcctcggagtgctcggagcatttggcaaccccggaggaggccatcggcttcctgcaggac
gacgtcgagaggatcagttccctgccctatgtcgagggcagcacgcggcagccaaaagcc
gccgtcgtgtcgctgttgaaccgcttgcggaccaggatcaccgttgccgaactcgccgcc
caatacggcagggccaaacgtgagcggggagtgctggactacggcgatctcgtctcactg
gcggcagcgatcgccaaggacgtaccgcaggcccgcgagctggaacgtctgcggtacaaa
gtggtgctgctggacgaattccaagacacctcgcatgcgcaaatggtgctgttctcccaa
cttttcggcgacggccatcccgttaccgcagtaggggacccgaaccagtccatttatgga
ttccggggagcctcggccggacagctttttgccttccgccagcatttcccgctcgtcgac
gaggacgggcagcgcagcgtcgctcccgccagcttcctgaccgtggcctggcgcaatgcc
atcaacgtgctcgccatggcgaatacgatttcgtcgccgctgaacagggtagacccgaac
cggccgaagccgggccggctcgaggtgcctgcactcaggccgcgtccgaacgcggtcgag
ggcactgttgtcctgtcccgctaccgcagcgagtccgaggaggcggaacaggtggctgcc
ggcgtggcaagggcacgccggaccgtattcgagcgggatccggagaccggcagggccgaa
cctgtcaccacggccgtgttgtgccggcggcgtgcgcagatcgccggcgttgcgaaagca
ctcgcggacaagggcattccctatgagatcgtcggactggccggactgctgagccaaccg
gagatcatcgacctcgtcgctaccctccgcgtcctggccgatcccggccgttccgactcc
ctcatgcgcttgctggctggtgcccgctggcgcatagggcccgcggacctgatggcgttt
gccgattggtcgcgctttctggagtcccagcggcgccgggcggccgaggacaggcagacg
gtggatctggatgccgacgaacaggcatcgcccctggtcgtccagcaggatctggccgag
gcggcctcgctggtggaagccctggaccgtttgcccaaacccggctggacatcgcgcaat
ggacgctcgctgactcccgaggcgctggcacgcctggagcggctgtcggcggaggtccgg
cagttgcggactttcgtgggggacgagcttcccctgctgctgggcgaagtcgaacgggcc
atgctgctcgacatcgaagtggcttccaaacccggcgttaccatccaccaggcacggcgg
catctggatgccttccatgatgcggccgcgacattcatgcagaccgcgcagcgggttgac
ctgttggctttcctagcctggctcgaagccgccgcggcagaggaaggcggactggatgtc
gtccaggtcgacgtgagcaaggacgccgtgcagttgctgacggtccatgcttccaaggga
ttggaatgggacgctgtatttgttcccggactcaacgacggtgcctttcctagcggctcc
gacaaccgctggagcagcggaaacgaggccttgccctggcccttgcgtggcgacggggcg
gacctgccgcagtgggacaccgagcagccggaccaattgtcctggttcaccgccgaagaa
gtctacaaaggtgaggtccaggcccacaacgaacaggaggagcggcgcctggcctacgtg
gcgtacacgcgggccaagcacctgctggtctgcagctccgcgggctgggcaggcagcaag
gtcaaaccctgcgcaccgtcaatattcctgaccgagctggccgaactggcgcagcaggac
ccgtcgacggtgcaggtcagtacctggatctccgacgaggagcttggcgacaccaacccg
ttccgtgaagaaaccgagacggccttctggccctacgatcccttggaaggcccgctggta
taccggggtggagagccggaaccggcccgtcccggccgacgtgctgccatggaggcagct
agccagacggtgctgcaggccattgcggaggaccggaagcttgagcagggggcaccgtgg
gccagggaaacggagctgctgctccaggagcacaatgcctcccgtggagccaacgagatt
gagctgccggcacacatctccgcctccatgctcgtggagctgaaagacaaccccggcgag
gtcacgcggtccttgcgtcggcccgtgccgcgcaggccaggcatcgccgcgcgcaaggga
accgcgttccacagctgggttgaggagcacttcggcaccgccggcatgctggatctggac
gacctgtcctcgcccgcggactcccatgtcgaccaggcctacgacctggagaccatgaaa
gccacgttcaaggcgtccgaatgggcggagaaggcgccggcggccatcgaagtacccgtc
gaaaccagagtggatgaggtcgtagtccggggccggatcgacgctgtcttccgggaccag
gacggaatctgggacctggtggactggaagactggttcaccgccctcgccggacaagctg
ggtatacgtgccgttcagctcgcagtgtaccggctggcctgggctcggttgcagggaatc
gaccctgcggaggtcaaggcagcgttctactacgtggcggcggataagaccgtgcggccc
cacgatctggccggtgaagccgaactcgaagccatcgtgcgcgcggcctacgccggttcc
gaacgctag
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