Crystallibacter crystallopoietes: AC20117_09190
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Entry
AC20117_09190 CDS
T05322
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
acry
Crystallibacter crystallopoietes
Pathway
acry03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
acry00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AC20117_09190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
acry03400
]
AC20117_09190
Enzymes [BR:
acry01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AC20117_09190
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AC20117_09190
DNA repair and recombination proteins [BR:
acry03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AC20117_09190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_TFIIB
NFACT_N
Ribosomal_S13
TniQ
Zn_ribbon_8
Zn_ribbon_RRN7
Prok-RING_1
Motif
Other DBs
NCBI-ProteinID:
AUI50965
UniProt:
A0A1H1BY22
LinkDB
All DBs
Position
1935997..1936878
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AA seq
293 aa
AA seq
DB search
MPEMPEVQGLVDFLRLKLLPPGAAPATIAQVEVLSFSVLKTADVPLEALIAEPLSGVERR
GKFIVLTAGGVHLVMHLAKAGWLRWSDALKPGPLRPGKGPMALRVRFAAETEEKPGFDLT
EAGTKKSLAVYVVKDPLDVPGIARLGPDALDVDHTAFAEIVTSHRGQIKGLLRDQSAIAG
IGNAYSDEILHAAHLSPFANAAKLDPDEVTRLFEAMHAVLAHAIASASGRPAAELKDSKR
KAMHVHARTGEACPVCGDTIREVSFADSSLQYCPTCQTGGKLLADRRTSKFLK
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagatgcccgaagtgcagggactcgttgacttcctgcggctgaaactccttccg
cctggcgccgcgccggccacgatcgcgcaggtggaggtgctttccttttcggtgctgaaa
accgcggacgtcccgctggaggcgctcatcgccgagccgctgtccggcgttgagcgacgc
ggcaagttcattgtcctcaccgccggtggcgtgcatctggtgatgcatctggccaaggcc
gggtggctgcgctggtcggatgcgctgaaaccagggccgctgcggcccggcaaggggccg
atggcgctgcgcgtgcggttcgcggccgagacagaagagaagccggggttcgacctgacg
gaagccggcaccaagaagtcgctggctgtctacgtggtcaaggatccgctcgacgtgccc
ggtatcgcgcggctggggccggacgcgctcgacgtcgaccatacggctttcgcggagatc
gtcacctcgcaccgtggccagattaagggcctgctgcgggaccagtcggcgatcgccggc
atcggcaacgcgtacagcgacgagatcctgcacgcagcgcacctgtcaccgttcgccaac
gccgccaagcttgatcccgacgaggtgacgaggctgttcgaggctatgcacgcggtgctg
gcgcacgcgattgccagcgcttcgggccgccccgcggccgaactgaaggattcgaaacgg
aaagcgatgcacgtgcacgcccgcaccggcgaagcgtgcccggtgtgcggggacacgatc
cgggaagtgtcctttgcagattcctcgctgcagtactgtcctacctgccagaccggcggg
aagctgctggctgaccgaaggacgtcgaagttcctcaagtga
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