Crystallibacter crystallopoietes: AC20117_10205
Help
Entry
AC20117_10205 CDS
T05322
Name
(GenBank) recombinase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
acry
Crystallibacter crystallopoietes
Pathway
acry03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acry00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AC20117_10205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acry03019
]
AC20117_10205
03400 DNA repair and recombination proteins [BR:
acry03400
]
AC20117_10205
Enzymes [BR:
acry01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AC20117_10205
Messenger RNA biogenesis [BR:
acry03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AC20117_10205
DNA repair and recombination proteins [BR:
acry03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AC20117_10205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
MFS18
Motif
Other DBs
NCBI-ProteinID:
AUI51134
UniProt:
A0A1H1BIP5
LinkDB
All DBs
Position
2153539..2155701
Genome browser
AA seq
720 aa
AA seq
DB search
MADLQSMTGQVTDLREEATEILRRLVGNPEAQFHSGQFEAVEALVAGGRRALVVQRTGWG
KSAVYFVASLLLRARGAGPTLIVSPLLALMRDQVSAAERAGVRAAAINSANQLEWDDIRA
KLAGNSVDVLLVSPERLNNPRFRDEQLPELIHSSGLLVIDEAHCISDWGHDFRPDYRRIR
DLIEQLPASVPVLATTATANLRVVHDIEEQLGAAALAGDVAAGGHVLTIRGPLARESLRL
GVLRLPNARARLGWLLTHLHELPGSGIIYALTVSNAEDTARLLREAGHEVLAYTGRTDPA
DREAAEAALKDNRVKALVATSALGMGFDKPDLGFVVHLGAPSSPVAYYQQVGRAGRGTPN
ADVLLLPGREDRDIWEYFATASMPNEDTALAVLRELAQPGTVLSTAALETRVNLKRSPLE
LLLKVLAVDGAVQRVSGGWEGTGQPWDYDRERYERIAKARVAEQNSMLDYENTTGCRMEF
LSRELDDPAAAPCGRCDNCAGRWYADSVAESATESADAALHRVGVELDPRAMWPTGMNRL
GVEVKGKIGPAEANLPGRALARLTDLGWGGKLRELLSDQSPDQPLDQLTLQACVRVLAEW
GWAQRPVAVVSVPSRTRPQLIGSLAEGLASIGRMPYLGALSMPGGGPKSGPGGNSAYRLA
DVWDQFEVPAGGAEWFADNPGPVLLVDDLADSRWTVTVAGRTLRRAGAEAVLPFALALKA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggctgatttgcagagcatgaccggacaggtgacagaccttcgggaagaagcaaccgaa
atcctccgccggctggtgggaaatccggaggcacagttccactcggggcagttcgaggct
gtggaagctctggtggccggcggccggcgggcgttggtggtccagaggacgggctgggga
aagtccgccgtctacttcgtggccagcctgctgctgcgtgcccggggtgccggcccgacc
ctgatcgtctccccgctgctcgcgctgatgcgggaccaggtctccgcggccgaacgcgcc
ggggtccgcgccgccgccatcaactcggccaaccagttggaatgggacgatatccgcgcc
aaactggcgggcaacagtgtggatgtcctgctggtctccccggagcggctgaataatcct
cggttccgggacgaacagttgccggaactgatccacagttcgggcctgctggtgatcgat
gaggcgcactgcatctcggactggggtcatgatttccgccccgactaccggcgcatccgg
gacctgatcgagcagttgcccgcatccgtgccggtactggccaccaccgcgacggcaaac
ttgcgcgtggtccatgacatcgaagaacagctcggggccgcggcccttgccggtgacgtt
gctgccggcggacatgtgctgaccatccgcggcccgctggccagagaatcgctgcggctg
ggcgtgctgcgcctgcccaatgcaagggcacggctgggctggctgctgacgcatctgcac
gagctgcccggcagcggcattatctacgccctgaccgtttccaacgccgaggataccgcc
cggctgctgcgcgaggcgggccacgaagtgctcgcctacaccggccggacggacccggcg
gaccgcgaagccgccgaggctgcgctgaaggacaaccgggtcaaggcactggtcgccacc
agcgcgctgggcatgggcttcgacaagccggacctgggattcgtggtgcacctcggggcg
ccgtcctcgccggtcgcgtactaccagcaggtgggtcgcgccggccgcggtacgccgaac
gctgatgtcttgctgctgcccggccgcgaagaccgcgatatctgggagtacttcgccacc
gcgtccatgccgaacgaggacaccgccctggccgtgctgcgggaactggcgcagccgggg
acagtcctgtccaccgcggcgctggaaacccgggtcaatctcaagcgctctccgctggaa
ctgctgctcaaagtgctggccgtggacggtgccgtgcagcgggtctccggcggctgggaa
ggcacagggcagccctgggattatgaccgcgagcgctacgagcgcattgcgaaggcgcgc
gtcgcggagcagaactccatgctggattacgagaacaccaccggctgccggatggaattc
ctgtcccgggagctggacgatccggcggccgcaccgtgcggccgctgcgacaactgcgcg
ggccgctggtacgcggactcggtggccgaatccgccaccgaaagcgccgatgccgccctg
caccgggtgggcgtcgaactggatccgcgcgcgatgtggcccaccggcatgaaccggctg
ggtgtggaggtcaaaggcaagatcggaccggcggaggcgaacctgcccggccgtgcgttg
gcccgtctgacggatctgggctggggcggcaaactgcgcgaactgctgtccgaccagtcg
ccggaccagccgctggaccagctgactctgcaggcctgcgtccgcgtgctcgcggaatgg
ggctgggcccagcggcccgtcgcggtggtcagcgtgccgtcccggacccgcccgcaacta
atcggttcgctggccgagggcctggccagcatcggacggatgccctacctgggcgctctg
tccatgcccggcggtggtccgaagagcggcccgggcggcaacagcgcgtaccgcctggcc
gacgtctgggaccagttcgaggtgcctgccggcggagccgaatggttcgcggacaacccg
gggccggtcctgctggtggatgatctggcggacagccggtggaccgttacggttgccggc
cgcacgttgcgccgggccggagccgaggccgtactgccgttcgccctggcgctgaaggcc
tga
DBGET
integrated database retrieval system
