Anolis carolinensis (green anole): 100552515
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Entry
100552515 CDS
T01608
Symbol
dhx36
Name
(RefSeq) DEAH-box helicase 36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100552515 (dhx36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100552515 (dhx36)
03012 Translation factors [BR:
acs03012
]
100552515 (dhx36)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100552515 (dhx36)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
100552515 (dhx36)
Translation factors [BR:
acs03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
100552515 (dhx36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
ATPase
NPHP3_N
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100552515
NCBI-ProteinID:
XP_008104345
Ensembl:
ENSACAG00000006905
LinkDB
All DBs
Position
3:16658479..16702046
Genome browser
AA seq
984 aa
AA seq
DB search
MSYEQRRGWSRGGGPSSSASSSSSGGGGRGGGRGRPPPHLKGREIGLWYARRQGAKSKEA
ERQQRAVVHMDERREEQIVQLLNSVQNKNEKEQEASSWWSDEERDTKEPPAKPSQPVVEK
PVVEKALERTRPTFEKTFLDQDSEFLLQENRPDINLDEQLKEDMLKKRSNSRYIEMQKFR
EKLPSYGMRKELVNLINSSQVTVISGETGCGKTTQVTQFILDDYIDRGKGSSCRIVCTQP
RRISAISVAERVAAERAEACGNGRSTGYQIRLESRLPRRQGSILYCTTGIVLQWLQSDKQ
LSSVSHIILDEIHERNLQSDVLITIIKDLLSIRLDLKVILMSATLNAEKFSEYFDNCPMI
HIPGFTYPVKEYLLEDVIEMLRYIPENTDRRPHWKKRFMQGRISRPEKEEKEEIYQERWP
DYLRQIRGRYSESTIDALEMMDDDKIDLNLVAALIKYIALEEEEGAILVFLPGWDNISTL
HDLLMSQIMFKSDRFIIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVV
YVIDGGKIKETHFDTQNNISTMAAEWVSIANAKQRKGRAGRVQPGQCYHLYNGLRASLLE
DYQLPEILRTPLEELCLQIKILKLGGIAHFLSKVMDPPSSDMVLLAIKHLMQLNALDRQE
ELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAASLSFKDPFVIPLGKEKVADAR
RKELSKNSKSDHLTVVNAFQGWEETRRRGFRYEKDFCWEYFLSSNTLQMLANMKGQFAEH
LLAAGFVNSRNPKDPKSNINSDNEKLLKAVICAGLYPKVAKIRANFSKKRKMVKVSTKTD
GSVNIHPKSVNVEETEFHYNWLVYHLKMRTSSIYLYDCTEVSPYCLLFFGGDISIQKDKD
QDTIAVDEWIVFQSPARIAHLVKDLKKELDDLLQEKIENPQPVDWNSNESRDTAVLTAII
DLITTQEKESARNFAPRFQNEQYS
NT seq
2955 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgagcagcgccggggctggagccgagggggcgggccttcctcctccgcctcg
tcctcctcctctggcggaggcgggagaggcggaggccggggccggccccctcctcacttg
aagggccgcgagatcggcctgtggtacgcgcgaaggcagggcgcgaagagcaaggaggcc
gagaggcagcagagagctgtagtgcatatggatgagcggagagaagaacagattgtgcag
ttgttgaacagtgttcagaataaaaatgaaaaagaacaagaagcctcgtcttggtggtct
gatgaagaaagggacacaaaagagcctcctgccaaaccaagccagcctgttgtggagaaa
cctgttgtggaaaaagctcttgaaagaactagaccaacctttgaaaaaacattcctagat
caagattcagaatttctcctacaagaaaataggccagatattaatttagatgagcaactt
aaagaagatatgttaaagaagaggagtaattccagatatattgagatgcagaaatttcga
gagaaactgccttcttatgggatgaggaaggagcttgtaaaccttataaacagcagtcaa
gttaccgtcataagtggtgagactggatgtggaaagactacccaagttactcaattcatt
ttggatgactatattgatagagggaagggttcttcctgccggattgtatgtacccaacct
aggaggatcagtgctatttcagtagcagagagagttgcagccgaaagggctgaggcatgt
ggtaatggaaggagcaccgggtatcaaattcgtcttgaaagtcggttaccaaggagacaa
ggttcaattttgtactgcacaacaggaattgtcctacagtggctccagtcagacaagcag
ttgtccagtgtaagtcatataatccttgatgaaatccacgagagaaacctacaatcagat
gttctaatcacaatcattaaagatctcttaagtatacggctagacctgaaagtaatactg
atgagtgctacactgaatgctgagaagttttcagaatattttgacaattgtcctatgatc
cacattcctggtttcacctaccctgtcaaggaataccttttagaagatgtaatagaaatg
cttaggtacattccagaaaacacagatcgcaggccacattggaagaagaggtttatgcaa
ggacgtataagcaggccagaaaaagaagagaaagaagaaatttatcaagagcgatggcca
gattatttaaggcaaattagaggacggtattcagaaagtacaattgatgcacttgaaatg
atggatgatgataaaattgacctcaatttggttgctgcactgatcaaatatattgccctt
gaggaagaggaaggtgcaatactggtatttcttcctggatgggacaacattagcactcta
catgaccttcttatgtctcaaattatgtttaaatcagacagattcattatcattcctttg
cattcattgatgcctactgttaaccagactcaagtgtttaagagaacccctcctggagtc
cgtaaaattgtaattgctaccaacattgctgagactagtattacaatagacgacgtggtt
tatgttatagatggagggaagataaaggaaactcattttgatacacagaacaacattagc
acaatggctgctgagtgggttagcatagcaaatgccaagcaaaggaaaggtagagcagga
agagtccagccaggtcagtgctatcacttatataatggtcttcgtgcaagtctgctagaa
gattaccagttgccagaaatcttaaggacacctttggaagaactttgtttgcaaataaaa
attttaaagctgggaggtattgctcactttctgagcaaggtaatggacccaccatcaagt
gacatggtgttgctggctataaaacatctcatgcaactgaacgcattagatcggcaagaa
gaattgactcctcttggagtccatttggcccggttaccagtggagcctcacataggaaag
atgattctcttcggagctttattctgttgcttagatccggttctcactattgcagccagc
ctcagcttcaaggatccttttgttatccccttgggtaaagaaaaagtagcagatgcgaga
agaaaggaactatcaaagaattctaaaagtgaccacctcacagttgtaaatgcttttcag
ggttgggaagaaactaggcgacgtggcttccggtatgaaaaggacttctgctgggagtat
tttctttcttcaaatactttgcagatgctggctaacatgaaagggcagtttgctgagcac
ctccttgcagctggctttgtgaatagtagaaatcccaaagatcctaaatccaacattaac
tcagacaatgagaagttactcaaagctgtcatctgtgctggcttgtatccaaaggttgca
aaaattcgagcaaatttcagcaaaaagagaaaaatggttaaagtttccactaaaacagat
ggatcagttaacatccatcccaaatctgtgaacgtcgaggagacagagttccattacaac
tggcttgtttaccatttgaaaatgcggactagtagtatatacttgtatgattgcacagag
gtctcgccatattgtcttttgttctttgggggagatatttctattcaaaaggacaaagat
caagatacaattgctgtggatgaatggattgtctttcagtctccagcaagaatagctcat
cttgtcaaggacttgaaaaaagaattggatgaccttctgcaagagaagatagaaaacccc
cagcctgtggactggaacagtaatgaatccagggacactgcagtgctgacagccattata
gacttaatcacaacgcaagagaaggaaagtgccagaaactttgcccctcgcttccagaat
gaacaatacagttaa
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