Anolis carolinensis (green anole): 100552642
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Entry
100552642 CDS
T01608
Symbol
wdr43
Name
(RefSeq) WD repeat domain 43
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
100552642 (wdr43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acs03009
]
100552642 (wdr43)
Ribosome biogenesis [BR:
acs03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
100552642 (wdr43)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Utp12
WD40_CDC20-Fz
Beta-prop_THOC3
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR3_2nd
WDR55
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SPT8
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Beta-prop_HPS5
Beta-prop_WDR75_1st
Beta-prop_IFT140_1st
Beta-prop_WDR41
PEP5_VPS11_N
Beta-prop_DCAF4
WD40_2
Beta-prop_RIG_1st
UTP15_C
Beta-prop_Vps41
Methyltrans_Mon_3rd
Motif
Other DBs
NCBI-GeneID:
100552642
NCBI-ProteinID:
XP_003216125
Ensembl:
ENSACAG00000009264
UniProt:
A0A803TYF3
LinkDB
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Position
1:248317111..248353248
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AA seq
686 aa
AA seq
DB search
MAAAAGDATCGCGEEASAPDGGVVFVAGTPCAFSPQERRLLALSGPDGRLRVWETSNSSL
RRPHREYVPSAHLSAACTCLAWAPPSGRRSSPAKEGPQRKKRKSEAVEASEQLDLLAIGT
ADGSILLYSTIKGELQSKLSGHDFKVNCVRWHQDNGCLYSCSDDKNIVEWNVRTCKVKCK
WKGDNSSVSSLCISPDGRMLLSAGRSIKLWDLETKEVYRHFTGHATAVSTLMFITERPLN
ENQPFDGITGLYFLSGAVHDRLLSVWQVRTDRKEKTAVMNFTVTDEPIHIDVTISESKEE
PVKLAVVCRDGQLHVFEQVLNGYCKKPLTSKCTIQIATPGDSSDSTPKPVPILAAAFCPD
KASLLLVYGNSLQPVLERVSLNSSEPHMCLVRDIQKTLTLKTEMAVTKVKTPIISSEVKT
LVPGIPGHSAAVQATSCRKKMETKRKPGGKEESIEDRLGAMDIDGMKVKQSSGELPQIDN
FAVLLVQGLESNDAEILNKVLQTRKDAIIKKTVARMPVHAVIPLLQELTKRLQGHPYSAS
QMVRWLKPVLTIHTSYLSTLPDLVPQLGMLYQLMESRVKTLQKLSRLHGKLYLIITQVAA
LKNTQDGPEVDQTAKLVYEEESSEESSEDEMVAEKDSDENWDEEDEEDDEKNSGRDELSD
KEEEMAIDKEINGESDLDPENESEEE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcggcgggagacgcgacttgcggctgcggggaagaggcctcggcgcccgac
ggcggcgtcgtcttcgtggcggggacgccgtgcgccttctccccccaagagcggcgccta
ttggcgctctcgggcccggatgggaggctccgcgtgtgggagacgagcaacagcagcctc
cgccgcccgcaccgcgagtacgtgccctcggcccacctcagcgccgcttgcacttgcctg
gcctgggccccaccgagtggacgccgctcttcgcccgccaaggagggccctcagagaaag
aagaggaaatctgaagcagtagaagcaagtgaacaattagatcttttggctattggtact
gcagatggcagcattttattatacagcacaataaaaggagaattacagagcaaattaagt
ggccatgactttaaagttaactgtgtacggtggcaccaggacaatggttgtttatatagc
tgttcagatgacaaaaatatcgtggaatggaacgtacggacgtgcaaagtgaaatgcaaa
tggaaaggagataacagcagtgtgagctcactgtgcatcagtcctgatggaaggatgctt
ctttcagctggtcgatctatcaaattgtgggacttggagaccaaagaagtctacagacat
ttcacaggacatgctacagcagtttcaacgcttatgttcatcacagaacgtcctctgaat
gaaaaccagccgtttgatggaattacaggactctatttcttatctggagcagtgcatgac
cggttactcagtgtgtggcaggtgagaacagacaggaaagaaaaaactgccgtgatgaat
ttcacagtaacagatgaaccaattcatattgacgtgacgatatcagaaagcaaggaggag
ccagtgaaacttgcagttgtatgcagagatggacagttgcatgtatttgagcaggtttta
aatggatactgcaaaaagccattgacatcgaaatgtacaatccagatagccacacctgga
gatagcagtgattccacaccaaaaccagtccctattttagcagctgcattttgtccagat
aaggcgtcattactccttgtctatggaaactccttacagcctgttcttgagagagtgtct
ttgaatagttcagaaccacacatgtgcttagtaagagacattcagaagactctgacactt
aaaacagaaatggctgtaacaaaggtaaaaactcctatcatcagttcagaagtcaaaacg
ttagtgcctggaattcctggacatagtgcagctgtccaagctacatcttgcaggaaaaaa
atggaaactaaacggaaaccaggtggcaaagaggagagcattgaagaccgccttggtgca
atggatattgatggaatgaaagtgaaacaatcatcaggagagcttccacagatagacaac
tttgcagtgcttttggtccagggcttggaaagcaatgatgctgaaattttaaacaaagta
cttcagaccaggaaggatgcaataataaagaaaacagtagccagaatgcctgtgcatgct
gtcattccactgctacaggagctcacaaaaaggctgcaaggtcacccatacagtgcctca
caaatggttcgatggctaaaacctgttttgactatacacacatcatatctttcaacattg
ccggatctggtccctcagctgggaatgctgtatcagttaatggagagcagggtgaagaca
ttgcagaaactgtctcgtttgcatgggaaactctatcttattattacccaggttgcagca
ctgaaaaacacacaggatgggcctgaggttgaccagactgcaaagctggtgtatgaggaa
gagtcatcagaagaaagttcagaggatgagatggttgcagaaaaagactcagatgagaat
tgggatgaagaggatgaggaagatgatgagaagaacagtggaagagacgaattatcagat
aaggaagaggagatggctatagataaagaaatcaatggtgaatcagatttggacccagaa
aatgaaagtgaagaagaatag
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