Anolis carolinensis (green anole): 100552907
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Entry
100552907 CDS
T01608
Symbol
alyref
Name
(RefSeq) Aly/REF export factor
KO
K12881
THO complex subunit 4
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03013
Nucleocytoplasmic transport
acs03015
mRNA surveillance pathway
acs03040
Spliceosome
acs05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100552907 (alyref)
09122 Translation
03013 Nucleocytoplasmic transport
100552907 (alyref)
03015 mRNA surveillance pathway
100552907 (alyref)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
100552907 (alyref)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100552907 (alyref)
03041 Spliceosome [BR:
acs03041
]
100552907 (alyref)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100552907 (alyref)
TREX complex
100552907 (alyref)
Spliceosome [BR:
acs03041
]
Complex C
Other components
EJC/TREX
100552907 (alyref)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100552907 (alyref)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Motif
Other DBs
NCBI-GeneID:
100552907
NCBI-ProteinID:
XP_008102800
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All DBs
Position
2:118563040..118568908
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AA seq
410 aa
AA seq
DB search
MVLRALRHIKGFDLMGVCCLAAELYETFSVDGGLGGTARCPEAASASSSSSSSNLPAYYA
YLPPYRKSLPQESRARQTTWRISFSGAEHEPERVHSPTHSQRFFLFLSLSSPRPVFSPSP
APSFPQNPRLHPFSVPSPRSAAGSVVLGAGGSRHHGRQNGHVFDDIIKLKPESARRRRAR
RARSGPRGRGARRRRRRPGRGGGGAGRAGGGGPIRNRAALSRGGGRNRPAPYSRPKQLPE
KWQHDLFESGFGPGAGVETGGKLLVSNLDFGVSDADIQELFAEFGTLKKAAVHYDRSGRS
LGTADVHFERKADALKAMKQYNGVPLDGRPMNIQLVTSQIDTQRRPIQSINRGGMTRNRG
GSGGFGGGNRRGSRGGRGRGRGAGRSSKQQLSAEELDAQLDAYNARMDTS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggtgttgagagccctgaggcacattaagggctttgatttgatgggcgtttgttgcctg
gctgccgaactgtatgaaacgtttagtgtagacgggggccttggcggaacagcccgctgc
cctgaggcggcctccgcctcctcctcctcctcctcctccaaccttcccgcctattacgcc
tacctacccccttaccggaagtccctcccccaagaaagccgagcacgacagacaacttgg
cgcatttctttcagcggagccgagcacgagcccgagcgcgtccactcacccacccattcg
cagcgctttttccttttcctttccctttcctcaccgcggcctgttttttctccttcgccc
gccccttccttccctcagaatccccgccttcatccgttttcggtcccctccccgcgcagc
gcggccggaagcgtagtcctaggagccggagggagccggcatcatgggcgacaaaatgga
catgtctttgacgatattatcaagctgaaaccggagtcagcgaggcggaggcgggcgcgc
cgggcgaggtcggggccgaggggccgcggggcgaggaggaggcggcggaggcccgggcga
ggaggcggcggcgcggggcgcgcaggaggcggaggccccatccggaacagagctgccttg
tcccggggaggcggcaggaacaggccggcgccctacagccggcccaaacaacttcctgaa
aagtggcaacacgacctcttcgaaagtggctttggtcctggcgctggtgtggagacgggc
ggaaagctcctggtctctaatctagattttggtgtgtcagatgcggacatacaggaactt
tttgcagagtttggtacattgaagaaggcagcagtgcactatgaccgatctgggcgtagt
ctgggtactgcagatgttcattttgagaggaaggcagatgctctgaaggctatgaaacag
tacaatggagttcccctggatggacgtcccatgaatatccagctggttacatcacaaata
gatacacagaggagaccaatacagagcataaatagaggaggcatgactagaaaccgtggc
ggatcaggtggctttggtggtggcaacagacgaggtagccgtggtggcagaggcagaggt
agaggtgcaggcagaagttccaaacagcaactctctgctgaagaattggatgcacagttg
gatgcttacaatgccaggatggacaccagttaa
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