Anolis carolinensis (green anole): 100553016 Help Entry 100553016         CDS       T01608                                  Symbol col2a1 Name (RefSeq) collagen type II alpha 1 chain   KO K19719   collagen type II alpha Organism acs  Anolis carolinensis (green anole) Pathway acs04510   Focal adhesion acs04512   ECM-receptor interaction acs04518   Integrin signaling Brite KEGG Orthology (KO) [BR:acs00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100553016 (col2a1)    04518 Integrin signaling     100553016 (col2a1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     100553016 (col2a1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:acs00536]     100553016 (col2a1) Glycosaminoglycan binding proteins [BR:acs00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100553016 (col2a1) SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI VWC VWC2L_2nd Motif Other DBs NCBI-GeneID:  100553016 NCBI-ProteinID:  XP_008119414 Ensembl:  ENSACAG00000006064 LinkDB All DBs Position Unknown AA seq 1490 aa AA seqDB search MFRRVDSRTVVLLAAAQVVLLAVVQCQDEDIQEAGNCVQDGQRYSDKDVWKPEPCRICVC DTGTVLCDDILCEEMRDCPNPEIPFGECCPICPTDQPTTSGQPGPKGQKGEPGDIKDVVG PRGPLGPQGPSGEQGPRGERGDKGEKGTPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGG NFGAQMAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPPGSPGPQGFQGSPGEPGESGTSG PMGPRGPPGPPGKPGDDGEAGKPGKSGERGLPGPQGARGFPGTPGLPGVKGHRGFPGLDG SKGEAGAPGAKGESGSAGENGSPGPMGPRGLPGERGRPGSSGAAGARGNDGLPGPAGPPG PVGPAGSPGFPGAPGAKGEAGPTGARGPEGAQGSRGEPGNPGSPGPSGASGNPGNDGIPG AKGSAGAPGIAGAPGFPGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEHGPAG PQGPPGPAGEEGKRGGRGEPGSAGPIGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPPG LGGPKGASGDPGRPGEPGLPGARGLTGRPGDAGPQGKLGPSGAPGEDGRPGPPGPQGARG QPGVMGFPGPKGANGEAGKAGEKGLPGAPGLRGLPGKDGETGAGGPPGPSGPAGERGEQG APGPSGFQGLPGPPGPPGENGKSGDQGVPGEAGAPGLVGPRGERGFPGERGSAGAQGLQG PRGLPGTPGTDGPKGATGPPGALGAQGPPGLQGMPGERGAAGIGGPKGDRGDVGEKGPEG APGKDGNRGLTGPIGPPGPAGGNGEKGEAGPPGPSGAAGARGAPGDRGEPGAPGPAGFAG PPGADGQPGAKGEQGESGQKGDAGSPGPQGPSGAPGPQGPNGVTGPKGARGAQGPPGATG FPGAAGRVGPPGPNGNPGAAGPPGAAGKDGPKGARGDAGPTGRAGDPGLQGPAGAPGEKG DSGEDGPPGADGPPGPQGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGASGGPGDRG PPGPVGPPGLTGPSGEPGREGNPGADGPPGRDGSAGVKGDRGETGPAGGPGAPGPPGSPG PVGPTGKQGDRGESGAQGPLGPAGPAGARGMPGPQGPRGDKGEAGEAGERGLKGHRGFTG LQGLPGPPGPSGDQGASGPSGPSGPRGPPGPVGPSGKDGSNGMPGPIGPPGPRGRSGETG PAGPPGNPGPPGPPGPPGPGIDMSAFAGLGGREKGPDPLRYMRDDQSSGNLRQHDVEVDA TLKSLNNQIESIRSPEGSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAIKVFCNM ETGETCVYPKPSSIPKKNWWTSKSKDKKHVWFGETINGGFHFSYGDDNLAPNTANIQMTF LRLLSTEGSQNLTYHCKNSIAYMDEASGNLKKALLIQGSNDVEIRAEGNSRFTYSALQDG CTKHTGKWGKTIIEYRSQKTSRLPIVDIAPMDIGGADQEFGVDIGPVCFL NT seq 4473 nt NT seq  +upstreamnt  +downstreamnt atgttccgccgtgtggattcaaggactgtagtgctcctggcagccgctcaggtcgtttta ttagcagtggtccaatgtcaggatgaggatatacaggaggcaggcaactgtgtgcaggat gggcagaggtatagtgataaagatgtatggaaacccgaaccctgccggatttgtgtctgt gatactgggacggtcctctgcgatgacatactctgcgaagaaatgagagattgtcccaac cccgagatccccttcggagaatgttgccccatctgtccaactgaccagcctaccaccagt gggcaacctggacccaagggacaaaaaggagaacctggcgatattaaagatgttgtagga ccaagaggcccccttggaccacagggaccttccggtgaacaaggaccaagaggagaacgt ggtgataaaggagaaaaaggtacccctggcccccgtggcagagatggcgaacctggtaca cctggcaaccctggccctcctggacccccaggccctccaggcccccctggtcttggcgga aactttggtgctcagatggctggaggatttgatgagaaagcaggaggtgctcagatggga gtgatgcaaggacctatgggacctatgggaccacgagggcccccaggaccaccaggatct cctggccctcaaggatttcaaggcagccctggagaacccggagaatctggcactagtggt ccaatgggtccccgtggcccacctggacctcctggaaaacctggtgatgacggtgaagct ggcaaacctggcaaatctggagaacgtggactacctgggcctcagggcgctcgaggtttt cctgggaccccaggtcttcctggtgtaaagggacacagaggtttccctggattagatggt tccaagggagaagctggtgctccaggtgctaagggtgaatctgggtctgcgggtgagaat ggttctcctggccccatgggtccccgtggtctcccaggtgagagaggacgtcctggctct tctggtgctgctggtgctcgtggtaatgatggccttcctggtccagctggtccacccgga cccgttggtcctgctggatccccaggcttcccaggtgcaccaggtgcaaagggtgaagct ggccctactggcgctcgtggacctgagggtgcccaaggttcccgaggtgaacctggaaac cctggctctcctggcccgtcaggagcttcaggcaaccctggaaatgatggaatccctggt gccaaaggatctgcgggtgctcctggcattgctggcgctcctggtttccctggtccccgt ggaccacctgggcctcagggggcaactgggcctttgggtcccaaaggtcagacgggagaa cctggaattgcaggcttcaaaggtgaacaaggccccaagggtgaacatggccctgctggc ccacaagggcctcctggaccagctggtgaggaaggcaagagaggtggccgtggtgaacca ggatctgcagggcccattggaccacctggcgagaggggtgctcccggaaatcgtggtttc ccaggacaagatggattagctggtcccaagggtgctcctggtgaacgtggacctcctggc cttggaggtcccaaaggtgctagtggagatcctggccgtcctggagagcctggccttcct ggtgctaggggtctcactggtcgtcccggtgatgctggtcctcaaggcaaacttggtcca tctggtgctcctggtgaagatggacggcctggtccccctggtccacaaggtgcccgtggt cagcctggtgtcatgggcttcccaggacctaaaggtgctaatggtgaagctggtaaagct ggtgaaaagggacttcctggtgctcctggactaaggggtcttcctggtaaagatggcgag acaggagctggtggacccccaggaccttctggcccagctggtgagagaggtgaacaaggt gctccaggaccttctggattccagggtcttccagggcccccaggtcctccaggtgaaaat ggcaaatcaggtgaccagggtgttcctggtgaggctggtgctcctggtcttgttggtccc agaggtgaacgtggtttcccaggtgaacgtgggtctgcaggtgcccaaggtttgcaagga cctcgtgggcttcctggcactcctggtactgatgggcccaagggtgcaactggtcctcct ggtgcccttggagcacaagggcctcccggtctgcagggaatgcctggcgagagaggagct gcaggtatcggtggaccaaaaggagacaggggtgatgttggtgagaagggcccagaaggt gcacctggcaaagatggaaacagaggtttgactggtcccattggtccccctggcccagct ggtggcaacggagagaagggtgaagctggtcctcctggcccatctggtgcagccggtgct cgtggggcccctggtgaccgtggtgaacctggtgctcctggtcctgctggatttgctggc ccccctggtgctgatggccaacctggtgctaaaggcgagcaaggtgaatctggacagaaa ggagatgctggatctccaggccctcaaggtccatctggggctcctggcccacagggtcct aatggtgtgactggtccaaaaggagctcgtggtgcacagggacccccaggtgccactgga ttccctggtgcagcaggacgagtgggaccaccaggtcccaatggtaatcctggagctgct ggcccaccaggtgctgctgggaaagatggccccaaaggtgctcgtggtgatgcaggccca actggtcgtgctggtgaccctggtttgcaaggccctgctggtgccccaggcgagaaggga gactctggcgaagatggccctcctggtgctgatggcccacctggacctcaaggtttggct ggtcaaagaggcattgtaggtctccctggacagcgtggtgagagaggcttccctggactg cctggtccttctggtgagcctggcaaacaaggagcttctggtggtcctggtgacagaggc ccccctggccccgttggcccccctggtctgactggtccctctggtgaacctggacgtgag ggcaatcctggtgcagatggtccccctggaagagatggttctgctggagtgaaaggtgat cgtggtgagactggtcctgctggtggccctggtgctcctggcccacctggctctccaggc cctgttggaccaactggcaaacaaggagacagaggcgaatcaggtgctcaaggtccattg ggtccagctggccctgcaggggcacgtggcatgcctggtccacaaggtcctcgtggtgac aagggtgaagctggcgaggcaggagagcgtggtctgaagggacacagaggattcactggt cttcagggtcttcctggacctcctggtccttctggagatcaaggggcaagtggtccttct ggtccctctggccccaggggtcccccaggccctgttggcccctctggcaaagatggctcc aacgggatgcctggtccaattggtcctcctggtccacgtggtcgtagtggtgaaactggc cctgctggtcctcctggaaatcctggacctcctggtcctcccggccctcctggtcctggt attgacatgtcagcctttgctggcctgggcgggagggagaaaggccctgatcctctccgt tacatgcgagatgaccaatcttctggtaacctgaggcagcatgatgttgaggtcgacgct accctgaagtccctgaacaaccagattgaaagcatccgaagtccagaaggcagcaggaaa aacccagctcgtacctgccgtgacctgaaactctgccaccctgaatggaagagtggtgac tattggattgatcctaaccagggctgcactttggatgctatcaaggttttctgcaatatg gagactggagagacttgtgtctatcccaagcctagtagcattcccaagaagaactggtgg acaagcaagagcaaggataagaagcatgtctggtttggagagaccatcaatggaggtttc cactttagctatggagatgacaacctggctcctaacactgccaacatccagatgactttc ctgcgcctcttgtcaacggaaggctcacagaacctcacctaccactgcaagaacagcatt gcctacatggacgaggcctctgggaaccttaagaaagctctcctgatccagggatccaat gatgtggagatcagagctgagggcaacagcaggtttacatacagtgccttgcaggatggc tgcacgaaacacactggcaaatggggtaagacaataattgaatacagatcacagaagacc tcacgcctgcccatcgttgacattgcgcctatggacattggtggagctgatcaggaattc ggcgttgacattggccccgtgtgctttttgtaa

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