Anolis carolinensis (green anole): 100553046
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Entry
100553046 CDS
T01608
Symbol
pdzrn3
Name
(RefSeq) PDZ domain containing ring finger 3
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
acs04121
]
100553046 (pdzrn3)
Enzymes [BR:
acs01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
100553046 (pdzrn3)
Ubiquitin system [BR:
acs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
100553046 (pdzrn3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Motif
Other DBs
NCBI-GeneID:
100553046
NCBI-ProteinID:
XP_008103570
Ensembl:
ENSACAG00000014911
LinkDB
All DBs
Position
2:178760104..178961562
Genome browser
AA seq
789 aa
AA seq
DB search
MDNQDGSSSEGIFVSKIADTGPAAKEGGLQIHDRIIEVNGKDLSKATHDQAVEAFKTAKD
PIVVQVLRRAPRTKVFSPSPECLLVDTGTQTDITFEHIMALSKMGSPTPPVLDSYLLPEE
HSSGHEYYDPNDYMGGIHQDMDREELELEEVDLHRVNSQDKFGLTVCYRTDDEDDIGIYI
SEIDPNSIAAKDGRIREGDRIIQINGIEIQNREEAVALLTSEESKNVSLLIARPEILQLD
EGWMDDDRNDFLDDLHMDMLEEQHHQAMQFTASMLQQKKKNEEDGGTTDTATILSNQHEK
DSGVGRTDESTRNDESSEQENNVDDHTTASNTLGSQKKLTYSHDTLGSGDMPFSNESFIS
ADCTDADFLGIPVDECERFRELLELKCQVKSANPYNIYYHNSTLDMSKSDHESVDRELEM
LNEELRSIELECLNIVRAHKMQQLKEQCREPWMLHNSGFRNYNTSIDLRRHELSDITELP
EKSDKDSSSAYNTGESCRSTPLTLEISPNNSLCRTAEGLKSQGSEGAEGSEKTLLTSPES
LESSTSQLHPKDVDLSNPLEINERKVTDGSRSPGQPSKPGGYLSSYQHSPYKHAHIPAHA
QHYQSYMQLIQQKSAVEYAQSQMSLVSMCKDLNSSNQSEPRMEWKVKVRSDGTRYITKRP
VRDRLLRERAIKIKEERSGMTTDDDAISEMKMGRYWSKEERKQHIVKAKEQRRRREFMMQ
SRLECLKEQQGAEEKKEVNIIELSHKKMMKKRNKKIFDNWMTIQELLTHGTKSPDGTKVY
NSFLSVTTV
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggacaaccaagatggctcatccagtgaaggaatttttgtctctaaaatagctgacact
ggacctgctgccaaagaaggaggactgcagattcatgacaggattattgaagtaaatggg
aaggatttatctaaagcaactcatgatcaagcagtagaagcattcaaaacagcgaaagat
cccattgtggtccaggtcctgaggagagcccctcgcaccaaggtcttcagcccatctcca
gaatgccttctggtcgatacaggcacccaaacagacatcacctttgaacacatcatggct
ctatccaagatgggctcaccgaccccacctgttttggattcatatctgttacctgaggag
cattcatcagggcatgaatactacgacccaaatgattacatgggaggcattcatcaagac
atggaccgagaagagctagaattagaggaagtggatttgcatcgagtgaacagccaggac
aaatttgggcttacagtgtgctatagaaccgatgatgaagatgatattggcatttatatc
agtgagattgatcccaacagcattgcagcaaaggatggtcggatcagagagggagatcga
ataattcaaattaatggcattgagatacaaaatcgagaagaagctgtggcactccttacc
agcgaagaaagcaagaatgtctccttgctcatagcaagaccagaaattctccagctggat
gaaggatggatggatgatgacagaaatgatttcttagatgatttgcacatggacatgtta
gaggaacagcaccaccaagcaatgcagtttactgccagcatgctccaacagaagaagaaa
aatgaagaggatggaggtacaacagacactgcaaccattttatcaaaccagcatgagaag
gacagcggcgtcgggcgtactgatgaaagcacccgcaatgatgaaagctcagagcaagaa
aacaatgtggacgatcacactaccgcctccaacactttggggagtcagaagaagctgaca
tacagccatgacactctgggcagtggtgacatgccattcagtaatgagtcatttatttct
gctgactgcaccgatgcagatttcctgggcatcccagtagatgagtgtgagaggttccga
gaactgctggaactgaaatgccaggtgaaatctgcaaacccatacaacatatactaccac
aacagtactctggatatgagcaaaagtgaccatgagagtgtggacagggagctggagatg
ctgaatgaggagctacgcagtatcgagctggagtgtctcaacattgtgagggcccacaag
atgcagcagctgaaagaacagtgccgggaaccgtggatgctgcacaatagcggattccgc
aactataatacaagcattgatctccgtcggcatgaactctcggatattaccgagctgcct
gagaaatcagacaaggacagctccagtgcttacaacacaggggaaagttgccgaagcaca
cctctcacactggagatctcacccaacaactctctctgcaggacagcagaaggcctcaaa
tcccaaggcagtgaaggggcagaaggctctgagaaaaccttgctgactagcccagagagt
cttgaatccagcacatctcaacttcacccaaaagatgttgaccttagcaacccattggaa
attaatgagagaaaagtcactgatggaagcagaagcccaggtcaaccctccaaaccgggt
ggctacttgtcttcctatcagcactctccttataaacatgcccacatccctgcccatgcc
cagcactatcagagttacatgcagctgatacagcagaagtcagcagtggagtatgcgcaa
agccagatgagtctagtgagcatgtgcaaagacttgaactcctcaaaccagagtgaaccc
agaatggaatggaaagtcaaagtcaggagtgatggtacccgttacattactaagagacca
gtaagggataggttgctgagagaacgtgccataaagatcaaggaagagcgcagcggcatg
accacagatgatgatgccataagtgaaatgaagatgggccgctactggagcaaggaggag
cggaagcaacatattgtaaaagccaaggaacagaggcgacgacgcgagtttatgatgcag
agcagattagaatgtttgaaggagcagcaaggggctgaggagaagaaggaggtgaatatc
atagaactgagccacaaaaaaatgatgaagaaaaggaataaaaagatatttgacaattgg
atgacaatccaggaactcctaacccatggcacaaagtcacccgatggcacaaaagtttac
aactcctttctgtcggtgaccacagtataa
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integrated database retrieval system
