Anolis carolinensis (green anole): 100553125
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Entry
100553125 CDS
T01608
Symbol
pcdh18
Name
(RefSeq) protocadherin 18
KO
K16499
protocadherin delta 2
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
acs04515
]
100553125 (pcdh18)
Cell adhesion molecules [BR:
acs04515
]
Cadherins
Protocadherins
100553125 (pcdh18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Syndecan
PepSY
MpPF26
Ly49
Motif
Other DBs
NCBI-GeneID:
100553125
NCBI-ProteinID:
XP_003221708
Ensembl:
ENSACAG00000013347
UniProt:
G1KNM5
LinkDB
All DBs
Position
5:121202491..121211554
Genome browser
AA seq
1132 aa
AA seq
DB search
MPSWRPWALAAGYLLACCCCGLPSAAGKTLKYRIYEEQRVGSVIARLSEDVADVLYRLPN
PSAVRFRAMQRGSAPLLAVREDNGEISVGAKVDREQLCQKNLNCSIEFDVITLPTEHLQL
FHVEVEVLDINDNAPQFSRALIPLEISESAAVGTRIPLDSAFDPDVGDNSLDTYSLSPND
FFTVEVRTRTDGAKYAELIVVKELDRELRSSYELQLTASDNGVPQRTGSSLLKISISDSN
DNSPVFQQQTYVIQLPENSRVGTLLIDLNATDPDEGNNGKVVYSFSSHVSSKILETFKMD
PERGQLTLLKPVDYETTKSYEIDAQAQDLGPNSIPAHCKIIIKVVDVNDNKPEINLNLMS
PGKEEVAYISEKASIETFVALVRVQDKDSGLNGEVVCKLHGHGHFKLQKTYENNYFILTN
TTLDREKRSEYSLTVVAEDKGTPSLSTVKHFTVQIVDENDNPPQFQTNRYEIVILENNSP
GAYITSVTATDPDLGDNGQVTYTILESFILGSSITTYVTIDPSNGAIYALRTFDHEEVNQ
IAFVVQARDGGTQQLASNTTVVLTIIDENDNAPVIVSPVLHNNTAELSIPKDAENNYRVT
RIRAIDRDSGMNSELSCSLASSSEASFFIMDPQTCDIYLNGSIESAKSTEWELSVVVQDK
GSPQLSTKALLKCSVVKNVYLPSTTEATYSQPSLDFSWIAIISLGVICAILLVIMVVFAT
RCNREKKDTRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTVNGTLPIRSHHKASPSSS
PTLERGQMSSCQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEVSQLLSMLHQGQY
QPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEGFSD
LFLTDGRIPAAMRLCTEECRVLGHSDQCWMPPLPSPSSDYRSNMFIPGEEFQPQQTQPQQ
QQVLEEDSQAVESSEKKKSFSTFGKDSQNEEESGDVCTSSLLSEMNSVFQRLLPPSLDAY
TECNEMDPSSSLERRKGPLPAKTVSYPQGVAAWAASTHFQNPVNSTGLPLGTHSGAQPSS
KWLPAMEEIPENYEEDDFDNVLNHLSDGKHELMDASELVAEINKLLQDVRQN
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcttggcggccctgggccctggcggcgggctacctgctggcctgctgctgctgc
gggctgcccagcgcggcgggcaagaccctcaagtaccgcatctacgaggagcagcgggtg
ggctcggtgatcgcccggctctcggaggacgtggccgacgtgctctaccgcctgcccaac
ccgtcggcggtccgcttccgagccatgcagcggggcagcgcgcctttgctggccgtgcgc
gaggacaacggcgagatctccgtgggcgccaaggtggaccgcgagcagctctgccagaag
aacctcaactgctccatcgagttcgacgtcatcaccctcccgaccgagcacctccagctc
ttccacgtcgaggtcgaggtgctggacatcaacgacaacgcgccgcagttctcccgcgcg
ctgatcccgctggagatctccgagagcgccgctgtgggcacccgcatcccgctggacagc
gccttcgaccccgacgtgggagacaactccctcgacacctattccctctccccgaatgac
ttcttcaccgtcgaggtcaggaccaggaccgacggggccaagtacgcggagctgatcgtg
gtcaaggagttggatagggagctgagatccagctacgagcttcagctcactgcctctgac
aacggtgtcccccagcgcactgggtcctccctgcttaaaatcagcatctccgactccaac
gacaacagccccgtcttccagcagcagacctatgtcatccagctcccggagaactcccgt
gtgggcaccttgctcattgacctcaacgccaccgacccggacgagggcaacaatggcaaa
gtggtctactccttcagcagccacgtgtcatccaaaatcctagagactttcaaaatggac
cccgaaagagggcagctcaccctcttgaaacccgtggactacgaaaccaccaaatcctat
gagattgatgcccaggcccaggatctgggtcccaattccatcccagcacactgcaagatc
atcattaaggtggtggacgtgaatgacaacaagcccgaaatcaatttgaacctgatgtct
ccagggaaagaggaggtggcgtatatctccgaaaaggcgtccatcgagacttttgtggcc
ctggttcgggtgcaagacaaggattccggcctcaacggggaggtggtgtgcaaacttcat
ggccacggccacttcaaactccaaaagacctatgaaaataattatttcatcctaaccaac
accactctggatcgggaaaagaggtccgagtacagcctgacggtcgttgcggaggacaag
gggacgccaagcctctccaccgtgaaacacttcacagtccagattgtcgatgaaaatgac
aacccgccccaattccagacaaacagatacgaaattgtgattttggaaaataattctcct
ggggcatacatcacctctgtgacagcaacagacccagatctgggagacaatgggcaagtg
acctacacaatcttggagagttttattttggggagctccataactacctatgttaccatt
gatccctccaatggagccatctatgcactaaggacctttgaccatgaagaagtaaaccag
attgcctttgtggttcaagctagagatggagggactcaacagcttgccagcaatacaaca
gttgtgttgactatcattgatgaaaatgacaatgcccctgtgattgtgagtccagtactg
cacaacaatacagccgaactctcaatccccaaagatgcagaaaataactaccgtgtcact
aggataagagccatagatagagactcagggatgaactcagagctgagctgttcattagca
agcagtagcgaagccagcttcttcataatggacccacagacatgtgacatctatctcaat
ggtagcattgaatctgccaagtcaacagaatgggaactttcagtggtggttcaggacaaa
ggaagtcctcagctcagtaccaaagcacttctgaaatgcagcgttgttaaaaatgtctat
ttgccttcaactacagaagccacctatagccaaccttctctagatttttcctggattgcc
attatatccttaggagtaatatgtgcaattttgctagttatcatggttgtttttgctaca
aggtgcaatcgggagaaaaaggacaccaggtcatataactgccgtgttgcggagtccacg
tatcagcatcatcccaaaaggccatcgagacagatccataagggggacatcacactagtg
cctacggtaaatggtactttacccatcaggtctcatcacaaagcttcaccttcatcatct
ccaacactagaaagagggcagatgagcagctgccaaagccatcacagccaccagtctcta
aatagcctggtgaccatctcatcaaatcacgtgccagagaatttctctcttgagctcact
catgctactcctgctgttgaggtttctcagcttctttcaatgcttcatcaaggccagtat
cagccaaggccaagttttcggggaaacaaatattctagaagctacaggtatgcccttcaa
gatatggataagttcagcttgaaagacagcggccggggtgacagtgaagcaggagacagt
gattatgatttggggagagattctccaattgacagacttcttggagaaggattcagtgac
cttttcctcacagatgggagaattcctgcagcaatgagattatgcacagaagaatgcaga
gtcctagggcattctgaccaatgctggatgcctcctctaccttctccatcttctgattat
agaagtaatatgtttattcctggagaagaatttcagccacagcaaacccaaccacagcag
cagcaggtattagaagaggactctcaagctgttgaatcatctgaaaaaaagaagagcttt
tcaacttttggcaaagatagtcagaatgaagaagaatctggtgacgtgtgtacctcatct
ctactctctgaaatgaatagtgttttccagcgtctgttgcctccttcattagatgcctac
actgaatgcaacgaaatggatccctccagttcacttgagcgtaggaaaggacccttgcct
gccaagactgtcagctatccacaaggggtggccgcatgggcagccagtacacacttccaa
aaccctgtgaacagcactgggcttcctttggggactcattcaggtgcccagccatcttca
aaatggcttccagccatggaggaaatcccagagaactatgaagaagatgactttgacaat
gtccttaaccacctcagtgatggtaaacatgaactaatggatgctagcgagctggtggca
gaaatcaacaagctactacaagatgtccggcagaactaa
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integrated database retrieval system