Anolis carolinensis (green anole): 100553177
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Entry
100553177 CDS
T01608
Symbol
rc3h1
Name
(RefSeq) ring finger and CCCH-type domains 1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acs03000
]
100553177 (rc3h1)
04121 Ubiquitin system [BR:
acs04121
]
100553177 (rc3h1)
Transcription factors [BR:
acs03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
100553177 (rc3h1)
Ubiquitin system [BR:
acs04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
100553177 (rc3h1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_UBOX
zf-RING_2
zf-C3HC4_4
Prok-RING_4
zf-CCCH
zf-C3HC4_3
zf-C3HC4
zf-C3HC4_2
zf_CCCH_4
zf-CCCH_4
FYVE
zf-RING_10
PaaA_PaaC
Vesi_VP2
Baculo_IE-1
zf-RING_4
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
100553177
NCBI-ProteinID:
XP_003219912
Ensembl:
ENSACAG00000015271
LinkDB
All DBs
Position
4:complement(71453407..71523160)
Genome browser
AA seq
1129 aa
AA seq
DB search
MPVQAPQWTDFLSCPICTQTFDETIRKPISLGCGHTVCKMCLNKLHRKACPFDQTTINTD
IEHLPVNSALLQLVGAQAPEQQPVTLHSGAEDTKHYEEAKKCVEELALYLKPLSSARGVG
LNSTTQSVLSRPMQRKLVTLVHCQLVEEEGRIRAMRAARSLGERTVTELILQHQNPQQLS
SNLWAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKT
SIGHVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDSQIVQIAMEAGLRIAP
DQWSSLLYGDQSHKSHMQSIIDKLQTPASFAQSVQELTIALQRTGDPANLNRLRPHLELL
ANIDPSPDAPPPTWEQLENGLVAVRTVVHGLVDYIQNHSKKGADQQQPPQHSKYKTYMCR
DMKQRGGCPRGASCTFAHSQEELEKFRKMNKRLVPRRPLSASLGQLNEVGLSAAAILSDE
GAVDLPSRKPSALPNGIVSTGSTVTQLISRGTDSSYDSTLKPGKIDHHSSSAPGSPPELL
EPAPENSLSALPVNSHPAPPRGPADLPPISVGKQLQMVPRVSQMYPAQQTDMFYAGARGA
APPFEPPPYQPGVYYPAAQSSQCMSRFVRPPPSVPEPGPPYLEHYSPYLQDRMVNYNAQP
QQYPPMGQPVYPPHYDSRRVYPPAQPYQREEIIRGSPVPIEIPPPAVSPYVPEARDRYPQ
VEGYYPVSQHLNQIRPSYHREPYIRPPLQPHPSLDELHRRRKEIMAQLEERKVISPPPFA
PSPTLPPTLHSDEYMEEDLKVAGKYKGNDYSQYSPWSCDTIGSYIGTKDAKPKDIVAVGL
VEMVNLDSKGMRDQRLDLQRRAAETGDDDLIPFGDRPTVSRFGAISRTSKAMYQNPGPMQ
AMTVQGASTKPVNISDYSPYGTHNTWGGAPYSPHQNIPSQGRLSERERLSVTEVAGHGKA
LPSSEREQQLRLELQQLNHQISQQTRGLEGVSNRLLLQREANALAGQPQPPPPKWPGMIS
SEQLSLELHQVEREIGKRTRELSMESQSSLDIKSKVGSSKQSENGQQSKVQAEDLGGTFS
DVPNGSASNQENIGLLMNKTTALSLSEDTEEGGDDQDAQRTGAMSASAP
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtacaagctccacaatggacggattttctctcctgtcctatttgcacacaaacg
ttcgacgaaacaatccggaagcccatcagcctgggctgtggccacacagtatgcaagatg
tgcctgaacaagctccaccgcaaggcatgcccctttgaccagaccactatcaatacagat
atcgagcaccttcctgtgaattcagctttgctgcaacttgtgggtgctcaggcgcctgaa
caacagccagttactctacatagtggggctgaagataccaagcattatgaagaagccaag
aaatgtgtggaagaactagcattgtacctgaaaccactcagcagtgcaagaggtgtggga
ctgaacagcaccactcagagtgtactcagccgtcccatgcagcggaagcttgtgacatta
gttcactgccagctagtggaagaagaaggacgaatcagggctatgcgtgcagcacgttca
cttggagaaagaactgtcacagagctcatccttcagcatcagaatccccaacaactctct
tctaacctttgggctgcagtgagggccaggggctgccagttccttggaccagcaatgcag
gaggaagcccttaaattagttcttttggctttggaagatggatctgctttgtctcgaaag
gtcttggttctgtttgtggtacagaggttggaaccacgatttcctcaggcttctaaaacc
agcattgggcatgttgtccagcttctttacagagcctcttgtttcaaggtgactaagcgt
gatgaggattcctccttgatgcaactgaaggaagaattccgaacatatgaagccctgaga
cgagaacatgattcccaaattgtgcaaattgctatggaggctggtttgcgcatcgctcct
gatcagtggtcctcattactatatggagaccagtcccacaaatctcatatgcagtctatt
attgacaagttgcagaccccagcctcttttgcacagagtgttcaggaactaaccattgct
cttcagaggactggtgacccagctaatttgaatagacttcgaccccatctagaacttcta
gcaaatattgatcccagtccagatgccccaccaccaacatgggaacagcttgaaaatgga
ctggttgctgtgcgtactgtggtgcatggattggttgattacatccagaatcacagcaag
aaaggagcagatcagcagcagcctcctcaacacagcaaatataagacatacatgtgccga
gacatgaaacaaagaggaggatgtccccgtggggccagctgcacctttgcacattcacag
gaagaactagaaaaatttcgtaagatgaacaaacgactggttcctcggagacctctgagt
gcctccttaggtcaactgaatgaagtgggcctatcggcagcagctattctatcagatgaa
ggagctgtagacttgccgagcagaaaaccctctgccttgccaaatgggattgtttcaaca
ggcagtacagtgactcaacttatctctcgtggtactgattccagctacgattcgaccctg
aaacctgggaaaattgaccaccatagtagcagtgcccctggatcacctcctgaattgctg
gaacctgctcctgagaattctctatctgccttaccagtcaactctcacccagcaccgccg
cgtggtcctgcagacctgcccccaatatcagttggcaagcaacttcagatggtgccccgt
gtctctcagatgtatccagctcagcaaacagatatgttttatgcaggtgcacgaggagca
gctcccccatttgaaccacctccttatcaaccaggtgtatattatcctgcagctcagtct
tcacagtgcatgtcccgatttgttcggccgccaccatctgttcctgaaccaggtcctcct
tatttagaacattattcaccatacctccaagatcgcatggtgaattacaatgcacagcca
cagcaataccctcctatgggacagccagtgtaccctccccattatgacagccggcgcgta
tatccccctgcccagccataccagcgagaagaaattatccgaggaagtcctgtacccatt
gaaattcctccgcctgctgtatcgccatatgtacctgaagcaagagacagatatccacaa
gtagagggctactatccagtcagtcagcatctgaatcagatcagaccttcatatcacaga
gagccttatatccggcctcctcttcagccacatcccagcctagatgaattgcaccggcga
cgaaaggagatcatggcccagttagaagaaaggaaagtcatttcccctcctccttttgca
ccatcaccaactctgcctcccactttacacagtgatgagtacatggaagaagatttgaag
gtagctggcaaatacaaaggaaatgattacagccagtactccccctggtcgtgtgacacc
attggctcctacattggaaccaaagatgcaaaacccaaagacattgtggcagtgggactt
gtggagatggtgaatttagatagtaaagggatgcgagaccagaggctggacttgcaaagg
agagcagcagaaacgggtgatgatgatcttattccatttggggatcgtcctactgtttca
aggtttggtgccatctcacgtacatcaaaagcaatgtaccagaaccccggtcccatgcaa
gccatgacagttcaaggggcttctacaaaaccagttaatatttcagattacagcccttat
ggaacacacaatacatggggaggggcgccatattcaccccatcaaaacataccttctcag
ggacgtcttagtgaaagagagaggttatctgtgacagaggtcgctggccacgggaaggct
ttgccctcatctgaaagggaacagcaacttcgacttgaactgcagcaattaaatcatcag
attagccagcagacaagaggactggagggtgttagtaacaggctgctgttgcagagagag
gcgaatgccttggcaggccaaccacagcccccgcctcctaaatggcctggaatgatctca
agtgaacagctgagcttggagcttcatcaggtggagagggaaatcgggaagagaactcga
gagctgagcatggagagccagtcttcactggatatcaaaagcaaagtgggttccagtaag
cagtcagaaaatggacaacaaagcaaggtccaagctgaagaccttggagggacattcagt
gatgttccaaatggatcggcttcgaaccaggaaaatattggccttcttatgaacaaaact
acagctctgagcttgtcggaggatactgaagagggaggagatgaccaggatgcgcaaagg
actggagccatgtctgcttctgctccctaa
DBGET
integrated database retrieval system
