Anolis carolinensis (green anole): 100553647
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Entry
100553647 CDS
T01608
Symbol
nup54
Name
(RefSeq) nucleoporin 54
KO
K14308
nuclear pore complex protein Nup54
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100553647 (nup54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100553647 (nup54)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100553647 (nup54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
XhlA
Motif
Other DBs
NCBI-GeneID:
100553647
NCBI-ProteinID:
XP_003221875
Ensembl:
ENSACAG00000012626
UniProt:
G1KMN5
LinkDB
All DBs
Position
5:146913336..146928770
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AA seq
502 aa
AA seq
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MAFNFGAAASAAAAPNPAGAFGGFGTTTTAGGSTFSFSAPTNTGTTGIFGATQNKGFGFG
TSFGTATGTGTGLGTGLGTGLGFGGFNTQQQQPTLGSLFSQPAQAPVQSNQLINTASALS
APTLLGDERDAILAKWNQLQAFWGTGKGYFNSNIAPVEFSQENPFCRFKAVGYSCMPNNK
DEDGLVALVFNKKEAEVRSQQQQLVESLHKLLGSNQTLTVNVEGVKTMPDDLTEVIIYVV
ERSPNGTSRRVPATTLYAHFEQANIKSQLQQLGVSLTLARTELSPAQVKQLLQHPPAGVD
PIIWEQAKVDNPDPEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKNQ
TTTMAKIAQYKRKLMDLSHRTLQILIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAPT
QFKGRLNELMSQIRMQNHFGAVRSEERYYIDADLLREIKQHLKQQQEGLSHLISIIKDDL
EDIKLIEHGLNESIPLRGGVFS
NT seq
1509 nt
NT seq
+upstream
nt +downstream
nt
atggctttcaacttcggggccgctgccagcgctgccgccgccccgaaccccgcgggggcc
tttggcgggtttgggacaacaaccactgcaggtggatctacctttagcttctcagctcct
accaacacaggtaccactgggatttttggtgcgacccaaaacaaaggttttggatttggt
actagctttgggacagcaacaggcaccggtactggccttggcacaggcttgggaacaggc
ttgggatttggtggtttcaacactcaacagcagcaaccaacacttggaagccttttcagt
cagccggcccaggcccctgtccaatccaaccaactcataaacacagcaagtgctctttct
gcacccactcttttgggagatgagcgggatgcaattttggccaaatggaaccagctgcag
gccttttggggcacaggcaaaggatatttcaacagtaacatcgccccagtggaattttca
caggaaaacccattctgtagatttaaggcagtgggctacagctgcatgcccaacaacaag
gacgaagatggcttggtagcattggttttcaacaaaaaggaagcagaggtccgaagccag
cagcagcaacttgttgaatcattgcacaaactcttaggttcaaaccagactctcaccgta
aatgttgaaggggtgaagacaatgccagatgacctgactgaagtaatcatctatgtggtt
gagcggtcaccaaacgggacttccaggcgagtcccagctaccactctctatgcacacttt
gaacaagcaaacatcaaaagccaactgcagcagcttggagttagcctgaccttggcaaga
acagaactgtcgcctgcacaggtcaagcagctgctgcagcatcctcccgcaggcgtagac
cctatcatttgggaacaggccaaagtggataatcctgatcctgaaaagttgattcctgtg
ccaatggttggcttcaaagaactcttgaggaggttgaaagtccaagaccaaatgacaaaa
cagcatcaaactagattagatataatctcggaagatataagtgagcttcagaaaaaccag
acaacaacaatggccaaaatagctcagtacaaaaggaaacttatggatctttctcacaga
acgttacagattttaattaaacaagagatccagaggaaaagcggctatgccatccaagcc
gatgaagaacagctgcgagtacaattggatacaattcagtgtgaactcaatgcacccaca
cagtttaagggtcggctgaatgaactgatgtctcagattaggatgcagaaccactttgga
gccgtgcgatcggaagagcggtactacatcgatgctgacctcttgcgtgaaattaaacag
catttgaagcagcaacaagaaggcctcagtcacctgatcagcatcataaaagacgacctg
gaagatataaagctgatagagcacggattaaatgaaagcatccctctcagaggaggagtc
ttcagctga
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