Anolis carolinensis (green anole): 100554467
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Entry
100554467 CDS
T01608
Symbol
cstf3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100554467 (cstf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
acs03019
]
100554467 (cstf3)
Messenger RNA biogenesis [BR:
acs03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100554467 (cstf3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
DUF2971
VapC50_C
Motif
Other DBs
NCBI-GeneID:
100554467
NCBI-ProteinID:
XP_003214749
Ensembl:
ENSACAG00000002823
UniProt:
G1KBE9
LinkDB
All DBs
Position
1:complement(61511229..61572502)
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AA seq
718 aa
AA seq
DB search
MSGETPAGDQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVA
QFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYK
EKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNP
MINIEQLWRDYSKYEEGINIHLAKKMIEDRSRDYINARRVAKEYETVMKGLDRNAPSVPP
QNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQ
YLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKV
HSIYNRLLAVEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDARTRHHVYVTAALME
YYCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE
KSGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSAS
ELKALGYKDVSRAKLATLIPDPVVAPSIVPVLKDDADRKPEYPKPDTQQMIPFQPRHLAP
PGLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEILRRCKLPDTVDEAVRII
TGGLPDLSMEGNGPLENNALLNKSVKRPNEDSDEEEDKGSVVPPIHDIYRARQQKRIR
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtctggagaaactcccgccggcgaccaggctgctgaatatgtcccagaaaaagtaaag
aaagctgaaaagaaactagaagagaatccatatgaccttgacgcttggagcattctcatt
cgagaggcacagaatcagcctatagacaaagcacggaagacctatgaacgccttgttgcc
cagttcccaagttctggcagattctggaaactgtacattgaagctgagataaaagcaaaa
aactatgacaaagtagaaaagttgtttcagcggtgccttatgaaagttttacatattgac
ctgtggaaatgctacctttcatatgtgcgagaaaccaaaggaaagctacctagttataaa
gagaaaatggcccaggcatatgactttgctctggataaaattggcatggaaataatgtca
taccagatctgggtggattacatcaattttttgaaaggcgttgaagcagtaggatcctat
gcagaaaaccagaggataactgccgttcgcagggtttatcaacggggctgtgtgaaccca
atgattaacattgagcaactctggcgagattatagcaagtatgaagagggaatcaatatc
catttagctaagaaaatgattgaagatcgtagtagagattatataaatgcaagacgtgtg
gctaaggaatatgagacggtgatgaaaggtctagaccgcaatgctccttctgtcccacca
caaaatacccctcaagaggctcagcaggtagacatgtggaagaaatatatacagtgggaa
aagagcaatcctctacgcactgaagaccaaaccctaataacaaaaagagtaatgtttgca
tatgagcaatgtctgttggtgctgggccatcatccagatatctggtacgaagctgcacaa
tatcttgagcaatccagcaaactactagctgagaaaggggatatgaataatgcgaaattg
ttcagtgatgaagctgcaaatatttatgaaagagctatcagcactttactaaaaaagaac
atgcttctttattttgcatatgccgattatgaggagagtcggatgaaatatgagaaggtg
cacagcatatataaccggctactggctgttgaagatattgatcccactttggtatacatt
cagtatatgaagttcgcaaggagagcagaaggcataaaatcaggtagaatgatatttaag
aaggctcgagaggatgcacgaacacgccatcatgtctatgttactgctgctctgatggag
tattactgcagcaaggacaagtcagtggcttttaagatctttgagctggggctaaagaaa
tatggagacattccagaatatgtcttggcatatattgattatctttctcatctgaatgag
gataataatacaagagtcctatttgaacgtgtattaacctcaggcagtcttccacctgag
aaatcgggagagatatgggcccgttttttagcctttgaaagcaatattggtgacttggct
agcatactaaaagtagagaaacggcgatttacagccttcaaagaagaatatgagggcaag
gaaacagctttactagtagaccgatataagttcatggatctgtacccttgttctgccagt
gaactcaaagcccttgggtacaaggatgtttctcgtgcgaagctagcaaccttaattcca
gatccagttgtagctccttcaatagtacctgtgttaaaagacgacgcggacaggaaacca
gagtatccaaaaccagacacacagcagatgattccatttcagccaagacatttagcacct
ccaggtttacacccagtccctggtggagtgtttccagttccacctgctgctgttgttctg
atgaaacttctcccacctcctgtgtgttttcagggcccatttgtgcaagtggatgagctc
atggagattcttaggaggtgtaaactcccagacactgtagatgaagctgtgaggattata
actggaggcttgcctgacctatcaatggaagggaatggacctttggaaaataatgctctt
ttaaataaatctgtcaaaagaccaaatgaagattcagatgaggaggaagacaaagggtca
gtggtccctcccattcatgacatttacagagcgcgacaacaaaagcggatccggtga
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integrated database retrieval system
