Anolis carolinensis (green anole): 100554823
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Entry
100554823 CDS
T01608
Symbol
col4a5
Name
(RefSeq) collagen type IV alpha 5 chain
KO
K06237
collagen type IV alpha
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04510
Focal adhesion
acs04512
ECM-receptor interaction
acs04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100554823 (col4a5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100554823 (col4a5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
100554823 (col4a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
acs04147
]
100554823 (col4a5)
00536 Glycosaminoglycan binding proteins [BR:
acs00536
]
100554823 (col4a5)
Exosome [BR:
acs04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100554823 (col4a5)
Glycosaminoglycan binding proteins [BR:
acs00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100554823 (col4a5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100554823
NCBI-ProteinID:
XP_008112890
Ensembl:
ENSACAG00000012321
LinkDB
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Position
Un
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AA seq
1692 aa
AA seq
DB search
MKKRRMKESPGPSMLLLLLRLTLLLFLLGDADAAACHGCSSGSKCDCSGQKGEKGERGFP
GLEGQPGLPGFPGPEGPHGPRGEKGDDGLPGPSGPKGIRGPPGLPGFPGTPGLPGLPGQD
GPPGPSGIPGCNGTKGERGFPGSVGVPGSQGPPGQPGLPGMKGEPGEIITSSLPGQKGEQ
GYPGLPGITGPPGPVGASGPIGPPGPPGLTGVPGPPGLPGSKGNMGLNFQGPKGEKGDQG
LQGPPGPPGQIGEQKRPNDVEFQKGDQGAPGERGPSGPPGLPGPPGFPGGGKGEKGEQGE
PGKRGKTGKDGELGQPGLPGIPGNRGVPGFPGRDGEKGQKGDAGLPGPPGLVIPRPGTGA
TVGPKGSKGLPGFPGEKGERGYPGLEGPPGLPGPPGIPSIGPPGPPGLSGERGQKGDQGP
PGISIPGPPGIDGRPGSPGPPGLPGPPGTTIPPIGMLCEQGPPGPPGLPGQQGFVGERGQ
KGDKGDTCFNCIGSGIPGPPGEKGQPGLPGSPGSPGFTGPKGDKGFPGIIGLVGPPGLPG
VQGPPGRVGAKGDPGDVLAFPGMKGEKGDPGFPGPSGLPGLDGTPGKNGLPGSPGPKGEP
GGINYKGERGPSGDPGLSGPPGDRGPSGPPXIWPQGPPGEKGIQGXSGRPGPPGVPGPKG
EPGQTITESGSPGIPGPPGRDGEIGLPGDPGSPGQPGLPGVTGQKGEMGLPGIGLPGPPG
PKGFLGLPGLPGPPGAPGRPGQDGPPGPPGIAGLKGDRGFGVPGPAGPPGQPGLKGAQGP
RGDPGFSGSPGIPGRTGFDGTPGLKGDPGPRGQPGLVGSPGVPGIGEQGPPGAPGPPGPV
GPPGLQGVPGEKGDPGPPGFDVPGPPGDRGSPGFPGSPGLPGPPGPLGPPGRDGMPGLQG
GKGEMGVMGAPGPPGSPGTPGRSGLPGAKGNDGLPGQMGRPGSIGQKGSKGESGLPGLPG
KIDLDRLGSKGEKGEPGTPGMPGPTGLKGYQGIPGDPGPPGLVGQPGTPGLPGPKGDRGL
SGPPGPTGPPGQKGSSGEMGLPGPPGAKGLQGIAGRPGQPGSPGLTGLKGDKGNPGFSDI
SIPGPRGPKGDAGPPGYRGSPGVKGTPGNPGLPGLSGNPGAKGEMGLPGFPGTPGIPGPK
GIDGPPGNPGVPGSPGLPGEPGRSGPPGSPGEKGQPGQDGIPGPAGQKGEPGPPGFGRPG
PPGLPGLSGQKGELGLPGPPGSPGPTGLKGEMGPQGFPGLQGPSGPPGLPGPASEGPKGS
PGPPGMPGRPGPTGPEGARGPPGTGGVKGEKGNPGPAGQPGLPGLKGDQGLPGRPGEAGR
PGLNGMKGDHGVPGVPGFPGMKGPLGPPGPAGLSGDPGLPGSPGTPGIPGPAGQTIVVKG
DLGPPGPPGQPGMKGLPGVSGPPGLPGPIGLPGDAGRDGLPGFDGPGGRKGERGLPGQPG
LRGSQGPPGPDGMQGPPGSPGSASVAHGFLITRHSQTTDAPLCPEGTAEIYIGYSLLYVQ
GNERAHGQDLGTAGSCLRRFSTMPFMFCNINNVCNFASRNDYSYWLSTPAQMPMSMEPLT
GKSIQPFISRCSVCEAPAMVIAVHSQTIQIPQCPPGWNSLWIGYSFMMHTSAGAEGSGQA
LASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLATVEMTEMFSKPQSETLKAGDLRT
RISRCQVCMKRT
NT seq
5079 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaggaggatgaaggagagccctgggccttccatgctgctgctgctcctccgg
ctgacgctgctcctcttcctcctgggagacgccgacgccgcggcttgccatggatgctcc
tctggatccaaatgtgactgtagtggacaaaaaggagagaaaggcgagagaggattcccg
ggtttagaaggacaaccaggtttaccaggatttcctggaccagaaggaccacatgggcca
agaggcgaaaaaggagatgatggacttccaggaccatctggacccaaaggaattcgaggc
cctccaggtctaccgggctttccaggaacaccggggcttcctgggcttccaggccaagat
gggcccccaggaccttccggtatccccggatgcaacgggacaaagggggaacgtggtttt
cctggcagcgtaggtgtccccggttcacaaggcccccctggccaacctggcttaccagga
atgaagggcgaaccaggtgaaattataacatcctcgctaccaggacagaaaggcgaacag
ggatatccaggtcttccagggataacaggcccaccaggtcccgttggagcatcaggtccc
attggtcctcccgggccaccaggtttgacgggtgttcctggcccaccaggattaccaggc
tcaaagggcaacatgggcctgaacttccaaggacctaaaggagaaaagggtgaccagggt
cttcaaggtcctccagggccaccaggacaaataggcgaacagaagagaccaaacgacgta
gaatttcaaaaaggagatcagggtgctccaggtgagcgtggcccttcaggaccacctggg
ctaccaggtcctcctggctttcccggtggtggaaaaggtgaaaaaggtgagcaaggagaa
ccaggcaaaagaggaaaaactggcaaggatggagaattggggcagcctggattacctggc
atacctggtaatcgtggtgtcccaggatttccaggacgagatggggaaaagggtcagaaa
ggtgatgctggtcttcccggccctcctggacttgtgattcctagaccaggcacgggggca
acggtgggaccgaaaggaagcaaaggtttgcctgggtttcccggagaaaaaggcgagcgc
ggctaccccggtctggagggtccccccggccttccaggtcccccaggaattccaagcata
ggacctcctggaccaccaggtctttctggagaaagaggtcaaaagggtgatcaaggtcct
cctggtatttccatccctggtcctcctggaatagatggccgacctggatcccctggtcca
ccaggcctacccggcccaccaggaacaacaattccaccaattggtatgctgtgtgaacaa
ggacctcctggcccaccaggccttccggggcaacaaggatttgtgggagagagaggccag
aaaggagacaaaggggacacgtgtttcaactgcataggaagtggcatacctggaccgcca
ggggagaagggacaacctggtttacctggcagcccaggttctcctggtttcacagggcca
aaaggtgacaaaggattccctggcataattggcctggttgggcccccaggtcttcctggc
gtgcaagggcctcctgggcgtgtgggtgccaaaggcgatccaggtgatgtccttgctttt
cctggaatgaaaggtgaaaaaggagacccaggcttcccaggcccttcagggctgcccggt
ttagatgggacacctggaaaaaatggactgccaggatctcctgggcccaagggagagcca
ggagggatcaactacaaaggagaaaggggcccctctggcgatccaggactttctggacct
ccaggggatcgggggccgtcaggacccccttgaatttggccccagggtcccccaggagag
aaaggcatccaggggntctcaggtcgcccaggaccccccggagtcccaggacccaaagga
gaacctggtcaaactatcacagaatcagggtctcctggtatccctggccccccaggaagg
gatggtgaaattggccttccaggtgacccaggttctccagggcagccaggattgccagga
gtcaccgggcaaaaaggtgaaatgggattacctggcattggacttccaggcccacccggg
cccaaaggtttcctgggattgcctggtctcccaggaccacctggagcccctggaagacca
ggccaagatgggccacctgggccacccggaatagcaggactgaagggggatcgtggcttt
ggtgttccagggccagctgggccccccggacagccaggccttaaaggggcacaaggtcct
agaggtgaccctgggttttcagggagtcctgggatcccaggacgcacaggttttgatgga
actccaggacttaaaggtgaccctgggccccgtggccagccaggcttggtaggatctcca
ggcgtcccaggaatcggtgaacaaggcccaccgggtgcaccaggacccccaggacccgtg
ggtcccccaggattgcaaggcgtgccaggagaaaagggagacccaggtccacccgggttc
gacgttcctggtcctccaggtgacagaggcagcccaggtttcccaggatcacctggtctc
ccagggcctccaggtccacttgggccacctggacgagatggaatgccaggattacaaggt
ggcaaaggcgagatgggcgtgatgggggcacctggaccaccaggttctcctggaacccct
ggaaggagtggtcttcctggtgcaaaaggcaatgatggcttacctggccaaatgggccgt
cctggatctatagggcaaaaaggcagcaaaggagagtcaggccttcctggacttccaggg
aaaatcgatctagaccggttgggctccaaaggagaaaaaggagagccgggaactccaggt
atgcccggcccaacggggctgaagggctatcaaggcatcccaggtgacccagggcctcca
ggactagttgggcagccgggaacaccgggacttccaggtcccaaaggtgatcgaggatta
tctgggccccctgggccaaccggccccccgggacagaaaggttccagtggtgaaatgggt
ctgccaggtccccccggtgcaaaaggtttgcaaggcatcgcgggacgtcctgggcaacct
ggttcgcctggacttaccggactgaagggagacaaaggcaaccctggattttcagacatc
agcattccgggtccacggggcccaaagggagacgcagggccacctggctaccgagggagt
cccggtgtcaaagggactcctggtaatcctggtttaccaggtttgtctggtaacccaggt
gcaaaaggtgaaatgggcctccccggcttcccagggacgccaggtattcccggaccaaaa
ggtattgatggacctccaggtaacccaggtgtgccaggatcaccagggcttccaggtgaa
cctggtcgttctggacctccaggttctccaggggagaaaggacaacctggacaagatggc
attcctgggccagcaggacagaagggtgaaccaggtccaccaggatttggtcgtcccgga
cctccaggactcccaggactatcaggtcaaaagggtgaattagggttgcctgggccccca
ggttcaccgggccccactggtctgaagggggagatgggtccccaagggtttcctggtcta
caaggtccatctggccccccaggactcccagggccagcttcagaaggaccaaagggcagc
cctggaccgccgggcatgccagggaggccaggtccaaccggtccagaaggtgcccgtggg
ccccctggaactggaggagtcaagggggaaaagggcaaccccggtccagccggtcaacct
ggacttcccggcttaaaaggagatcaaggactacctggacgcccgggcgaagcaggacgt
ccaggtctgaatggaatgaaaggcgatcatggtgtcccaggtgttccaggattcccaggg
atgaagggaccccttggacctccaggaccagctggcctcagtggagaccctggccttcca
ggttcaccaggtactccagggatacctggtccagctggacaaaccattgtagtgaaagga
gatcttggtcctccaggtccaccaggtcagcctggaatgaaaggtctacctggtgtatca
ggccctccgggtttgccaggtccaatcggccttcctggtgatgctgggcgagatgggctg
cctggttttgatggtccaggaggacggaaaggggagcgaggactcccaggtcaaccaggt
ttacggggttctcagggtccccctggtccagatggcatgcagggcccccccggttccccc
ggttcggcttcagtcgctcatgggttcctgatcactcgccatagccagacgacggatgcc
ccgctctgcccggaaggaactgccgagatctacattggctattctctgctgtatgtccag
gggaacgagagagcccacgggcaggacttgggaactgccggcagctgcctccgccgtttc
agcaccatgcccttcatgttctgcaacatcaacaacgtctgcaattttgcatctagaaat
gactattcctattggctctctacccctgctcagatgcccatgagcatggagcccttaacc
ggaaagagcatacaaccatttattagccgctgctcagtctgtgaagctccagccatggtt
atagcagtccacagccaaaccatccaaatcccacaatgtccaccaggctggaattcatta
tggattggttattcttttatgatgcacaccagtgctggtgcagaaggatctggacaggca
ttggcttctcctggttcctgccttgaagaattccgctcggctcctttcattgagtgccat
ggacgggggacctgtaactattatgccaactcctacagcttctggctggcaactgtggag
atgacagaaatgtttagtaaacctcagtctgagacgctcaaggccggagacctgaggacg
cgtattagtcgatgccaagtatgtatgaagaggacgtaa
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integrated database retrieval system