Anolis carolinensis (green anole): 100555003
Help
Entry
100555003 CDS
T01608
Symbol
pdcd11
Name
(RefSeq) programmed cell death 11
KO
K14792
rRNA biogenesis protein RRP5
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
acs03009
]
100555003 (pdcd11)
Ribosome biogenesis [BR:
acs03009
]
Eukaryotic type
90S particles
Other 90S particles
100555003 (pdcd11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1_RRP5
S1
Spt6_S1
HAT_Syf1_CNRKL1_N
OB_RRP5
Suf
OB_RRP5_4th
HAT_PRP39_C
HAT_PRP39_N
TPR_14
HAT_Syf1_CNRKL1_C
ARM_TT21
TPR_19
TPR_CcmH_CycH
ARM_TT21_5th
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
100555003
NCBI-ProteinID:
XP_008104788
Ensembl:
ENSACAG00000004796
UniProt:
G1KDA1
LinkDB
All DBs
Position
3:40652552..40692332
Genome browser
AA seq
1814 aa
AA seq
DB search
MSSLEENFPRGGTQKKRQEGNTPRSQTIDQDNLFQAQNEEVTRKRKKKHQDQAEPKKLKS
DERAALKINAKDFELLTAESLTDGMLLLGCVKEAHQLELVISLPNGLTGFVQVTQICDAY
NKILNTQVATDEHLEDLSSLSDLFFPGMVVRCAVVNLEKTKAGRRSIQLSVNPKDVNKAL
NSSTLRPGMLLSGCIASVEDHGYLIDIGVPAAKAFLPRQKAQGYLQSNNKGAELKIGQYL
NCLIEDVKNNGRIIRISISQAEIAAAIATEEQNWSLSNLLPGLVVKAQVREVTPSGMSLG
FLSSFTGIVDFMHKNHLKGRTYSPGEMVKACILSNNPTTKAIRLSLRPAFLQPGTQLSQL
CSDRIGMIVENSKVKTFLSKTGAIFVLDDGSLGFAHQKHLSDSRLSFKPEKFKPGNEHKC
RIIEYSLMDDMALLSLKQNIMDAPFLKYQDIHPGQVLEGTILTLKPFGMHVKLTEYIKGL
VPCLHLADVPLKQPEKKYSEGASVKCRVLVSIPEARKIVLTLKKTLVNSKLPILASYEDA
KPGLITHGFVVCAREFGCIVKFYNDIKGLVPKNELGLPPLTPPQEVFYEGQVVKVMVLKC
EPEQGKVLLSFNLTDNPLDKTGRGEKTSKKQEKIYENAQVADVKILKKKDDGLDITILPN
NISAYLPMMHLSDYVSHSKLWSHWLKEDDLLHSVVCLHSKGRHLTLSRKPTLVLAAQEEH
AVKNFSDLEPGLLLTGFVKNIMPYGVFVEFPYGLTGMAPKSAMSDKFVTDTKDHFVIGQT
VIAKVTNIDEEKQRILLSLKLSDCSSEDSVSQSFSLLLQYFKELQEIKSIMKKRDDSSVA
QRLCEIKPAQKLELVVHKVETDGSAVFRGTCADGLTVVAAHSHLGGKNVAVGEKAEAVVL
YIDYLKAKIYVSLREELLSSKPKKLTLDSQYEAIVQHVATEYSVASLIGTGQLIAIPVTS
HFNDTFRFDSEKLKMGQSVMVVLKMVERGDYGLLLAVQAPGKRMTAIRSRRDSEALEETL
PTVKHSLCVGDVVKGTVKSVKPTHVLVAIDDHLMGSIHASQIVDDVFEGTFPTSLLKVGQ
KVTARVIGGREIRTHRYLPITHPHFTQTWPELSVRPSELKGENKTVLGPEDDKSEETLKL
FKPGQTVTCFVKKYNTEKKWLEVEVTPDIRGRIHELLLSLKPKILKKPGNFFKTGQALIA
TVTGCDTTGTKVYLSLSGVYSLEKGTITLGCIKSVIPHVGLQVTLPFGRTGKVSLFHLSD
SYTEQPLEDFSVGKIVRCYVLSDEDKTIKLSLRQSRVSPKSHNKIEDPEIASLDNIKKDQ
LIRGYVKSITATGILFRLSDSVVGCIPLQRITPVCVPDHSLCAKYIHPGQLLTAKVFSIN
KAENLVELSLLPEDTGNPSIIPELCSSETNTNLMKTRKRKRRNSENEQQQVKPKKRVHCT
EDDDSGVEIYCREEEEEEKYGRKSKQRKEISRLKISTSFTWEEGLNVLNTAMLKPKEQSS
DSEEEDDTETTTKKQTKKQRELEKQKAEKELSKLEAALMDPNRKPQTADDFDRLVLSNPD
SSILWLQYMAFHLQATEIEKARAVAERALKTISFREEQEKLNVWVALLNLENMYGTEEAL
MKVFERAIQYNEPLKVFQQLADIYTGSEKYKEADDLYNTMLKRFRQEKSVWVKYSTFLLK
RGLLEAAHRLLPRALKCLPEKEHVDVISKLAQLEFQFGDSEHGKAIFENTLSTYPKRTDI
WSVYIDMIIKHGSQKEVRDIFERVIHLSLAAKKMKFFFKRYLEYEKKYGTAETVQVVKAA
ALEYVESKGGLAEH
NT seq
5445 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccttagaagaaaatttccctcgagggggaacacagaagaaaagacaagaagga
aatacacccagatcacaaacaatagaccaagacaatttattccaggcacagaatgaagag
gtaactcggaaaagaaagaaaaaacaccaggatcaagcagaacccaaaaaactcaagtct
gatgagagagctgctttaaaaattaatgcaaaggattttgaacttctaacagctgagtct
ctcacagatgggatgctgctcctaggatgcgtgaaagaagctcatcagttggagctggtg
atcagtttgcccaatgggctcactgggtttgttcaagtgacacaaatatgtgatgcctac
aacaaaattctgaacactcaggtggccacagatgaacacttggaggatctgagttctctc
tcagacctgttctttccaggaatggtggtcagatgtgctgttgttaatttggagaagact
aaagcaggacgccgaagtatccagctctcagttaaccctaaggatgttaacaaggctttg
aattcttcaactctgaggcctggaatgctgctctctgggtgtattgcaagtgtggaagat
catggttaccttattgacataggtgttccagcagcaaaagcatttctgcctcgtcagaaa
gcccaggggtacctgcagtcaaacaacaaaggagctgaactgaaaatagggcagtatctg
aactgccttattgaagacgtaaagaacaatggaaggataatccgcatatccatcagtcag
gctgagattgcagcagccattgccacagaagaacaaaattggtcactcagcaacttgttg
cctggacttgtggtaaaagcccaggttcgggaggtgacgccttctggaatgtctttaggt
tttctgtcttcctttactggaattgtggatttcatgcataagaatcatctaaaaggaaga
acctattcacctggtgaaatggtaaaagcctgtattctttccaataatcccactaccaag
gcaatacgcctctctttgcgcccagccttccttcagcctggtacccagctcagccagctg
tgtagcgatcggattgggatgatagtggaaaactcaaaagtgaagaccttcctctccaaa
acgggtgccatctttgtgctggatgatggcagcctaggttttgcacatcaaaaacatctt
tcagattcacgcctgtctttcaaaccagagaagtttaagcctggaaacgagcataaatgt
cgaattattgagtacagcttaatggatgatatggcactgttgtctctcaaacaaaatatt
atggatgctccatttttgaaatatcaagatattcatcctggacaagttctggaaggcacc
atattgactctgaagccatttggcatgcatgtaaagttgactgagtacatcaagggcctg
gtcccttgcttgcatttggcagatgtgcctctgaaacaaccagaaaagaaatacagcgag
ggggcttctgtcaagtgcagggttcttgtctccatccctgaagcaaggaagattgtgctg
acgttaaaaaaaacacttgtcaattccaaactacctatcctggccagttatgaagatgct
aagccaggcctgatcacccatggctttgtggtttgtgcaagagaatttggttgcatcgtg
aaattctacaatgacataaaaggcctggtccctaagaatgagcttggtttgccaccattg
actcctcctcaggaggttttctatgaaggccaggtggtcaaagttatggtcttaaaatgt
gaacctgaacaggggaaagtgctcctctcatttaatctgacagataatcctcttgataag
actggtcgaggtgaaaagacttcaaagaaacaggaaaaaatatatgaaaatgcacaggtt
gctgatgtgaaaattttgaagaagaaagatgacggcttagatattacaatcttaccaaac
aacatttctgcttatcttcctatgatgcatctctctgactacgtgtcccatagcaaactc
tggagtcattggctcaaagaagatgatcttctacatagtgttgtgtgtctgcatagcaag
ggacgtcatcttacactaagtaggaagccaacgctggttttggctgcacaggaggaacat
gcagtaaagaacttctctgaccttgagcctggattgctgctgactggctttgtgaaaaac
atcatgccttatggtgtctttgtggaatttccatatggtttgacagggatggctcccaag
tcggcaatgagtgacaagtttgtgacagacaccaaagatcattttgtgataggccagact
gtgattgccaaagtgaccaacatcgatgaagagaagcagcgcatcctgctgtccctgaaa
ttgtctgactgctcctctgaggattctgtttcacagagcttctccttgctgctgcagtac
tttaaggagctgcaggaaatcaaaagcataatgaagaaaagagatgattcaagtgtggcc
cagagactctgtgaaataaaaccggcacagaaactggaattggttgttcacaaagttgaa
acagatggttcagcagttttcaggggcacttgtgctgatgggttgactgtcgtggctgct
cacagccatcttggaggcaaaaatgtagcagtgggtgaaaaagcagaagctgtggttctc
tacattgattatctgaaagcaaagatttatgtgtctcttcgggaggagctgctgtcctcc
aagcccaagaagttaaccttagactctcaatatgaggccattgtacaacatgtggcaaca
gagtattcagttgcttcactgataggaacagggcaactgattgctatccctgtgacttcg
cacttcaatgacacattccggtttgattctgaaaaactgaagatgggacagtccgtcatg
gtggttctgaaaatggtagagagaggtgattatgggctcttgcttgcggtgcaagcacca
gggaagagaatgactgcaattcggtcacggcgtgactcagaggcactcgaagaaaccttg
cccacagtgaagcactcactgtgcgtaggggacgtggttaaaggaactgtgaagtctgtc
aagcccacccacgtcctggtggcaattgatgaccacctgatgggctccattcatgcttcc
cagattgtggatgatgttttcgaaggcaccttcccaacatcccttctgaaggttgggcag
aaagtgactgcccgggtcattggaggcagagaaattagaactcacagatatttgcctatc
acccatccccacttcactcaaacatggccagagctcagtgtccgaccaagtgagctaaaa
ggagaaaacaaaacagtcttgggccctgaagatgacaaatcagaagagacattgaaactc
ttcaagcccgggcaaacggtaacttgctttgttaagaagtacaatactgaaaagaaatgg
ctagaggtggaagtcacccctgatatcagaggcagaatccatgaactactgctttccctg
aagcctaagatcttaaaaaaaccagggaatttcttcaagactgggcaggctttgattgca
acagtgacgggttgtgacactactgggaccaaagtatatctgtctctgtcaggcgtttac
tctctagagaaaggaaccatcacactaggctgcataaagagcgtgattccacatgttggc
ctgcaagttacgcttccatttggaaggactggcaaagttagcctttttcatctcagtgac
tcatatactgaacagccactagaagactttagcgttgggaagattgtcagatgttatgtc
ctttcagatgaagataaaacaataaaattatctcttcggcaatccagggtaagtcccaaa
agccacaataagatagaagaccctgaaatcgcatctctcgataatattaaaaaggatcag
ctcatcagaggctatgtgaaatccatcacagcaacaggtattttgtttagattgtctgac
tctgttgtgggttgcatcccgttgcaacgtatcacccctgtctgtgtaccagatcattct
ttgtgtgcaaaatacattcatccaggtcaactcctcactgccaaggtcttcagtataaat
aaagcagagaatttggtggagctctccctccttcctgaagacactgggaacccaagtatc
attccagaactttgttcaagtgaaacaaacacaaacttaatgaagacaagaaagcgaaaa
agaagaaattcagaaaatgaacagcagcaagtaaagccaaagaaaagagtgcattgtact
gaagatgatgatagtggtgtggagatctactgtcgagaggaggaagaggaagaaaagtat
gggaggaaatcgaagcagagaaaagaaatttctaggctgaagatttccacaagctttaca
tgggaggagggcttgaatgtgctgaatactgccatgttgaaaccaaaggaacaaagctcc
gatagtgaggaagaggatgatacagagaccacgaccaagaaacaaacaaagaagcaaagg
gagctggaaaagcagaaggcagagaaggaactctccaaacttgaagctgccttgatggac
cccaaccggaagcctcagacagcagacgattttgaccgcttggtccttagcaatcctgac
agctccatcctctggttgcagtatatggcgtttcatctacaggccacagagatagagaag
gccagagctgtagcagaaagagcactcaaaaccatctcctttagagaagaacaagagaag
ctcaatgtatgggttgccctgctgaacctggagaacatgtatggcacagaggaggcactg
atgaaagtctttgaaagagctattcagtacaatgaacctttgaaagtcttccaacagttg
gcagacatctacactggctctgagaaatataaggaagctgatgatttgtataacacaatg
ctgaagcgctttcgacaggagaaatctgtgtgggtgaaatactccactttccttctgaag
agaggactgttggaagcagctcacagactcctccctcgtgcactgaaatgtctgccagaa
aaagaacatgtggatgtgatttcaaagctggcacagctggagttccaatttggtgattct
gaacacgggaaggccatttttgagaacaccctgagcacatacccgaaacgcacagacatc
tggtcagtgtacatagacatgataataaaacatggcagtcagaaggaagtgcgagacatt
tttgaacgagtgatacacctgagcctagcagcaaagaagatgaagttcttctttaagcgt
tatttggagtatgagaaaaagtatggcacagcagaaactgtccaggttgtgaaggcagca
gcgttggaatatgtggaatctaagggtggtcttgctgagcactga
DBGET
integrated database retrieval system
