Anolis carolinensis (green anole): 100555313
Help
Entry
100555313 CDS
T01608
Symbol
hif1a
Name
(RefSeq) hypoxia inducible factor 1 alpha subunit
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04137
Mitophagy - animal
acs04140
Autophagy - animal
acs04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
100555313 (hif1a)
04137 Mitophagy - animal
100555313 (hif1a)
04148 Efferocytosis
100555313 (hif1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
acs03000
]
100555313 (hif1a)
Transcription factors [BR:
acs03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
100555313 (hif1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
PAS
HIF-1
PAS_9
PAS_4
HLH
DDRGK
Motif
Other DBs
NCBI-GeneID:
100555313
NCBI-ProteinID:
XP_008121253
Ensembl:
ENSACAG00000016205
UniProt:
G1KSA4
LinkDB
All DBs
Position
1:complement(3185176..3250813)
Genome browser
AA seq
815 aa
AA seq
DB search
MEPGAALGGSSEKKRISSERRKEKSRDAARCRRSKESEVFYELAHQLPLPHHVSSHLDKA
SIMRLTISYLRMRKLLDAGDLEAEAEMETQLNCFYLKALDGFVMVLSEDGDMIYMSENVN
KCMGLTQFDLTGHSVFDFTHPCDHEELREMLTHRNGPVKKGKEQNTERSFFLRMKCTLTS
RGRTVNIKSATWKVLHCTGHIRVYDNCNNQTVCGYKKPPMTCLVLICEPIPHPSNIEVPL
DSKTFLSRHSLDMKFSYCDERITELIGYDPEELLGRSIYEYYHALDSDHLTKTHHDMFAK
GQVTTGQYRMLAKQGGYVWVETQATVIYNTKNSQPQCIVCVNYVLSGVVQGDLIFSLQQT
ECMLKPVESPEMGVIKILDQTELEDSNSLFEKLKKEPDALTYLAPAAGDTIIALDFDSDE
TDEQQFDEVPLYNDVMLPSSSEKLQSINLAMSPLPASEATKLLRSSADPALNREVVSKLE
PCTEPLDLSFSIRQTQDQPATPSDGSTSQSSPEPSSTPSDYCFDVDNEMASEFKLELVEK
LFAIDPESKKPFSMQETDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSASPPSSGATVA
GFQSTPVQLPTPDKIPPMTIKHEEDSKTHTAPIHMPLETNSVPASPYTDNSSRTASPVRT
GKGTIEQKENSSPGTPSLLTVTLGKSRSTAANEDINPKIIALHNIQRKRKMEQDGLLFQA
VGIGTLLAQSATPGTNVSLAWKRVKGCKPNGQSEVAEKTVILLPSDIASKLLGQSMDEKG
LPQLTSYDCEVNAPIQGNRNLLQGEELLKALDQVN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggagcccggcgccgctttgggaggctccagcgagaagaaaaggataagttcagaacga
aggaaggagaagtctcgagatgctgctagatgtcggaggagtaaggagtcagaggtcttc
tatgaacttgctcaccagttgcctctaccccatcatgtgagttcacatctcgacaaagca
tccattatgaggttaacaatcagctacctgcggatgagaaagctgctggatgcaggtgac
ttggaggcagaagctgaaatggagacacagctgaattgcttttacttaaaagcccttgat
ggatttgtcatggttctctcagaagatggtgacatgatctacatgtctgaaaatgtgaac
aagtgtatgggactcacacagtttgatctgactggacacagtgtgtttgatttcactcat
ccatgtgaccatgaagagctgagagaaatgctcacccatcggaacggtccagtgaaaaaa
ggaaaagagcaaaatacagagcgcagttttttcctcagaatgaagtgtacattgaccagc
agaggaaggactgtcaacataaagtctgccacatggaaggtgcttcactgcacaggacac
attcgggtctatgacaattgcaacaatcagaccgtgtgtggatataaaaaacctccaatg
acatgtttggtgttaatctgtgagcccatccctcacccatcaaatatagaagtccccttg
gacagcaaaacattcctcagccgacacagccttgacatgaaattttcatattgcgatgaa
aggattacagagctgattggctatgaccctgaagagctcctgggtcgctccatatatgaa
tactatcatgccttggactctgatcatctgaccaaaacacatcatgatatgttcgctaaa
gggcaagtgaccactgggcagtatagaatgcttgccaagcaagggggatatgtctgggtt
gagactcaagcaaccgtcatctacaacactaagaattcccagccacaatgtatagtttgt
gtgaattacgtcttgagtggcgttgttcagggggacttgatattttcactccagcaaaca
gagtgcatgttgaaaccagtagagtctcctgagatgggcgtgatcaagatacttgaccag
acagaactggaagacagcaacagcctctttgagaaattgaagaaggagccagatgcgtta
acctaccttgctcctgcggctggagacactatcatagcattagatttcgacagtgatgag
actgatgagcaacaatttgatgaagttcctttgtataatgatgtaatgctcccctcatcc
agtgagaaattgcagagtataaatttggcaatgtccccattacctgcttctgaagctaca
aaactgctccgtagcagtgctgatccagctctcaatagagaggtggtgtccaagctggag
ccctgcacggagcctttagatctttctttctccatccgtcagacgcaagaccagccagcc
actccttctgatggaagcaccagccaaagctcacctgagcccagtagtacccctagtgac
tactgttttgatgtggataatgagatggccagtgagttcaagttggagctggtggaaaaa
ctttttgcaattgatccagagtcaaaaaaaccattttctatgcaggaaactgatttagat
ttggaaatgttggctccctatatccccatggatgatgatttccagttacgttcctttgac
cagctttctccactagagagcagttctgcaagccctccttccagtggggccacagttgca
ggatttcaatcgactccagtgcagttacctaccccggacaagataccgcccatgacaatc
aaacatgaagaggattctaagacgcacacggctcccattcacatgcccctcgaaacgaac
agtgtcccggcatcgccatacacagataactcaagtcgaactgcatccccggtcagaacg
ggaaaaggcacaatagagcaaaaagagaactcaagtccagggacaccaagcttgttgaca
gtcacgttgggtaaaagtagatcaactgcagcaaatgaagacatcaacccaaagataata
gctctacataatattcagaggaagcggaagatggagcaggatggcttacttttccaagca
gtgggaattggcacattattggcgcagtctgcaactcctggaacaaatgtatcactggct
tggaaacgtgtaaaaggatgtaaacccaatgggcagagtgaggtggcagagaagacggtc
attttattaccctcagatatagcaagtaaactcctagggcagtcaatggatgagaaggga
cttccgcaacttaccagctatgactgtgaagtgaacgctcccatacagggcaacagaaac
ctgctacaaggagaagagttgctcaaagccctggatcaagtcaactga
DBGET
integrated database retrieval system
