Anolis carolinensis (green anole): 100555346
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Entry
100555346 CDS
T01608
Symbol
ythdc2
Name
(RefSeq) YTH domain containing 2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
acs
Anolis carolinensis (green anole)
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
acs03041
]
100555346 (ythdc2)
Enzymes [BR:
acs01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100555346 (ythdc2)
Spliceosome [BR:
acs03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100555346 (ythdc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
HA2_N
Ank_2
AAA_19
AAA_22
nSTAND3
Ank
ATPase
PhoH
AAA_16
AAA_7
AAA_23
Ank_4
AAA_29
T2SSE
ABC_tran
SRP54
Motif
Other DBs
NCBI-GeneID:
100555346
NCBI-ProteinID:
XP_003223042
Ensembl:
ENSACAG00000007754
LinkDB
All DBs
Position
Un
Genome browser
AA seq
1440 aa
AA seq
DB search
MSRPSSVSPRPPALSGPSISMAASTSSASSRGGGGRSKGLKDIRIDEEVKIAVNIALERF
RYGDQREMEFPSSFTSTERAFIHRLSQSLGLISKSKGKGANRYLTVKKKDGSELAHAVMT
CNLIPNTKHAIRSLVQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQ
IPVKRGESEFDSFRQSLPVYEKQDEIVRIIKENKVVLIVGETGSGKTTQIPQFLLDDSYK
NGIPCRIFCTQPRRLAAIAVAERVAAERREKIGQTIGYQIRLESRVSPKTLLTFCTNGVL
LRTLMAGDSALSTVTHVIVDEVHERDRFSDFLLTKLRDTLQKHSSLKLILSSAALDVNLF
VRYFGGCPVIYIPGRPFEVKEMFLEDLLRTTGYTNKEMIKYKKEKQREEKQQTTLTEWYS
AQDNSKPELQRQRAVLNVAEEYDLLDDGGDTVFSQLAEKDVNCLEPWLIKEMDACLSDIW
LHKDIDAFAQVFHLILTENVSVDYRHSETSATTLMVASGRGFLSQVEQLIGMGANVHIKS
SNGWTALEWAKHFGQTEVVDLLESYCASLESGNLDESSLVHANASELSVEDQELLKAYHH
SFDDEKVDLDLIMHLLYNICHSCEAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRFQ
VFMLHSNMQTSDQKKVLKTSPPGIRKIILSTNIAETSITVNDVVFVIDSGKMKEKSFDAL
NCVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELC
LHTKLLAPINCPIADFLMKAPEPPPALIVRNAVQMLKTIDAMDTWEDLTELGYHLADLPV
EPHLGKMVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDH
MALLRAFQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGD
IRDVNTNSENWAVVKGALVAGMYPNIVHVDRENTVLTGPKEKKVRFHPTSVLSQPQYKKI
PPANGQVAAIQALPTDWLIYDEMTRAHRIANIRCCSVVTPVTVALFCGSARLPSNASEVE
LSYKNLDGAPNDSSDSEMEDRTTANLAALKLDEWLNFKLDPEAASLLLQLRQKWHSLFLR
RMRAPSKPWSQVDEATIRAIIAVLSTEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSN
TSRKTSAEAEFADEAFNSERVLMKSASPAFHQPLKYKERSVLHPKRSTEDRSDQQISQIS
SSVKSTDSSSYPSPCASPSPPSSGKGSKSPSPRPNMPVRYFIMKSSNLRNLEISQQKGIW
STTPSNERKLNRAFWESSVVYLVFSVQGSGHFQGFARMSSEIGREKSQDWGSTGLGGVFK
VEWIRKESLPFQFAHHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWDRIPLGERNMAD
NT seq
4323 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggccgagcagcgtctccccgcggcctccggccctcagcgggccctccatctcc
atggctgcctccacctcctcggcctcctcccgcggtggcggcggccggtccaaggggctg
aaggacatccgcatcgacgaagaggttaaaatcgccgtcaacatcgccctggagcggttc
cgatacggagaccagcgagaaatggaatttccttcatccttcacaagtactgaaagagca
tttattcatcgattgagtcagtctcttggtctgatttctaaaagtaaggggaaaggagca
aacagatacctaacagtgaagaaaaaagatggatcagagttggcacatgcagtcatgaca
tgtaatttgatcccaaacacaaaacatgctattaggagtcttgtacagcgctttcctgtc
accaataaagagcgcacagagcttctgccaaagacagaaagaggaaatgtgtttgctgtt
gaagctgagaacagagaaatgagtaaaacaagtggccgacttaataatggcattcctcaa
atcccggtgaaacgtggagaatcagaatttgattcatttcgccagtctctaccagtttat
gaaaagcaagatgaaattgttagaattattaaagaaaataaagttgttttgattgtgggg
gaaactggatcagggaaaactacacagattcctcagtttctacttgatgatagttacaaa
aatggaataccatgtcgcatattttgcactcagccaaggcgtttggctgcgattgctgtt
gctgaaagggttgcggctgaaagaagagagaagattgggcagacgattggttatcagatc
cgactggaaagcagggtttctccaaagacactgttaacattttgcaccaatggtgtacta
cttcgtacactaatggctggagatagtgcactgtcaactgtaactcatgtcattgtggat
gaagttcatgagagggatcggttcagtgacttcctattaacgaagctgagagacacatta
cagaaacactcatctttgaaactgatcctctctagtgctgctctggatgtgaatctcttc
gtcaggtattttggaggctgtccagtgatatatataccgggaagaccatttgaagtaaaa
gagatgtttcttgaagacttattgagaaccacaggctatacaaataaagaaatgatcaaa
tacaaaaaggagaaacagcgagaggagaagcaacagacaactctgactgaatggtattct
gcacaagacaacagcaagccagaactacagagacaaagggcagtcctgaatgtagctgaa
gaatacgatctcttggatgatggtggtgacacagttttcagtcagttggctgaaaaagat
gtcaattgtcttgaaccttggctaattaaagaaatggatgcttgtctttccgatatctgg
ctacataaagacattgatgcctttgcacaagtcttccatcttattttaactgaaaatgtc
agtgttgattacagacacagcgagacaagtgcaacaactctaatggtagcttctggaaga
ggtttcttgagccaagttgaacagttgattggtatgggagcaaatgttcacatcaaatca
tccaatggctggacagcattggagtgggctaaacattttggacagacagaagtggttgac
cttctggaatcctactgtgcttcgctggagtctggcaatctagatgagagttccttggtc
catgccaatgccagtgaacttagtgttgaagatcaagaacttctgaaggcttatcatcat
agttttgatgatgaaaaggtggatctagacctgatcatgcatctactttacaatatctgt
catagctgtgaagctggtgcagttttaattttccttcctggatatgatgagattgttggc
ttacgggatcgcatactatttgatgacaagaggtttgctgataatgctcacagatttcag
gtttttatgctacattcaaatatgcagacatctgatcagaagaaagttctgaagacctca
cctccaggcatccgtaaaataatactttctacaaatattgcagaaaccagcatcacagtt
aacgatgttgtctttgtgattgactctggaaaaatgaaagagaaatcctttgatgcattg
aactgtgtaactatgctaaagatggtatggatttctaaagctagtgccattcaaagaaag
ggcagggcaggacgttgtcggcctggaatttgtttccgacttttcagtagactaagattt
caaaatatgctggaatttcagaccccagaacttttgagaatgcccctacaggaactgtgt
ttgcatacaaaattgctggctcccatcaattgtccaattgctgactttttaatgaaagct
ccagaaccaccacctgctttgattgtgagaaatgctgtacagatgcttaagacaatagat
gctatggatacctgggaagatctgacagaacttggctatcatttggctgatctaccagta
gaacctcatcttggtaaaatggtgttgtgtgccgttgtcctcaagtgcctggatcctatt
ctgacaattgcatgcactcttgcctatcgtgatccatttgtgctaccaacacaggcgtct
cagaaacgggcagccatgctatgcagaaaacgattcactgcaggaacgttcagtgaccat
atggcccttctccgggctttccaggcatggcagaaggcacgaagtgatggttgggaaaga
gctttttgtgagaaaaatttcctatctcaggcaacaatggagattatcataggaatgaga
acacagttacttggacaactcagagcatcaggatttgttagagccagaggtggtggtgat
ataagggatgtcaacacaaattcagaaaactgggctgtggttaaaggtgccttagtagct
ggaatgtatccaaatatagttcatgttgatagagagaacactgtactgactggaccaaaa
gagaaaaaagtccgatttcatcctacctcagttcttagccaacctcaatataaaaagatt
cctccagctaatggtcaagtggcagctattcaggcactccctactgactggcttatatat
gatgaaatgacaagagcccaccgaattgccaatatcaggtgctgttcagttgtaactcca
gtcactgtggcactcttctgtggatcagctaggttgccaagcaatgcttcagaggtagag
ttatcgtataagaatcttgatggtgctcccaatgacagcagtgacagcgaaatggaagac
agaacaaccgctaacttggctgcactgaaactggatgaatggctcaatttcaaactagat
ccagaggcagctagccttctccttcagctgaggcagaaatggcacagtttattcctgcga
cggatgagagctccttcaaagccctggtctcaagtggatgaggccacgatacgagccatc
atcgcagtgctgagcactgaagaacagtccgcaggtctacagcagccttcaggaattggg
cagagaccaagaccaatgtcctctgaagaacttcccttagcttcttcgtggagatcaaac
actagtcggaaaacctccgcagaagcagagtttgctgatgaggcttttaattctgagaga
gtcctcatgaagtctgcatctccagcatttcaccagccattgaaatacaaagagagaagc
gtattacatcctaaacgaagtacagaggacaggtccgaccagcagatttcacagatttca
tcatctgtgaaatctactgatagcagtagttatcccagcccctgtgctagtccttctcct
ccatcatctggaaagggctccaagtctccttctccaaggccaaatatgccagttcggtac
tttattatgaaaagcagcaatcttaggaaccttgagatttcacaacagaagggaatttgg
tctacaaccccaagtaatgagcgaaaactaaaccgagccttttgggagagcagtgttgtt
tatttggtgttttctgttcaagggtcaggacattttcagggttttgctcgcatgtcttca
gagattggacgcgagaaaagtcaggattggggctctactggtttagggggtgtattcaaa
gtggaatggatccgaaaagaaagtcttccctttcagtttgctcatcatttactcaaccct
tggaatgacaacaagaaagtacaaataagccgggatggccaggaactggaacctcaggtt
ggtgaacaattgctacaactgtgggaccgtattcctttgggagagagaaacatggctgat
tga
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integrated database retrieval system
