KEGG   Anolis carolinensis (green anole): 100555481
Entry
100555481         CDS       T01608                                 
Symbol
cstf1
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
acs  Anolis carolinensis (green anole)
Pathway
acs03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:acs00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100555481 (cstf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:acs03019]
    100555481 (cstf1)
Messenger RNA biogenesis [BR:acs03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     100555481 (cstf1)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_THOC3 Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd CSTF1_dimer WD40_Gbeta Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd NBCH_WD40 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 VPS8_N PROPPIN Beta-prop_WDR11_1st Beta-prop_WDR75_2nd Beta-prop_HPS5 Frtz Beta-prop_SPT8 DUF7099
Other DBs
NCBI-GeneID: 100555481
NCBI-ProteinID: XP_016850803
Ensembl: ENSACAG00000015997
LinkDB
Position
Unknown
AA seq 509 aa
MCGGSMQQPVRRSGPRSRLLLPPPPLPVPPPAPPGLPPAPLPLPPPPPEALGPPAAISSA
DRSRPKDGPAAGRQPLFTMYRPKVSLKDRQQLYKLIISQLLYDGYINIANGLINEVKPQS
VCAPSEQLLHLIKVGMENDDSAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETC
YVTSHKGPCRVATYSRDGQLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMEN
HPVIRTLYDHVDEVTCLAFHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRS
ISFHPSGDFILVGTQHPTLRLYDVNTFQCFVSCNPQDQHTDAICSVNYNASANMYVTGSK
DGCIKLWDGVSNRCITTFEKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLV
KYTGAGLSGRQVHRTQAVFNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNSIVRC
IVHSPTNPGFMTCSDDYRARFWYRRSTTD
NT seq 1530 nt   +upstreamnt  +downstreamnt
atgtgcgggggctcgatgcagcagcctgttcgacggagcggccctcggtcccgtttgctc
ctgccgccgccgccgcttcctgttcctcctcctgcgccgccaggcctccctccagccccg
ctgcctttgccgccgccgccccccgaagctctcgggcctccagcagctatttcgagcgcg
gatcgctcgagaccaaaggacgggccggctgctggaagacagcctttgttcaccatgtat
aggccaaaagtaagcttgaaagaccggcagcaactttacaaactgataattagtcaattg
ctctatgatggctatatcaacattgctaatggtttgataaatgaggtgaagccacagtct
gtttgtgccccctctgaacagttgttgcatcttattaaagtgggaatggaaaatgatgat
agtgctgttcagtatgccattgggcgctctgatacagttgctcctggcacaggaattgac
ttggagtttgatgcggatgtgcagactatgtctccagaggcttcagaatatgagacctgt
tatgtcacatcccacaaaggaccatgtcgtgtcgctacatatagcagagatggacaacta
atagctacagggtctgctgatgcctcaataaaaatattggatacagaaagaatgttggca
aagagcgctatgcccattgaggttatgatgaatgaaacagcccagcagaacatggagaac
cacccagttattaggaccctttatgatcatgtggatgaggtcacgtgtttagctttccac
ccaacagaacaaatccttgcctcaggatcaagagattacacacttaaattgtttgactat
tctaaaccatctgccaaaagagccttcaaatatatccaggaagcagagatgctgcgttct
atctcatttcatccttctggagacttcatacttgttgggactcagcatcctaccctgcga
ctgtatgacgttaacactttccagtgctttgtgtcttgtaatcctcaagaccagcacaca
gatgccatctgctcagttaattacaatgcaagtgctaacatgtatgtgacgggcagcaaa
gatggatgtatcaagctatgggatggtgtttcaaatcgttgtatcactacttttgagaaa
gcacatgatggggctgaagtctgttctgccattttttccaagaattcaaagtatattctc
tcaagtggaaaggactcagtagccaaactctgggagatatctacagggagaacgctagtc
aaatatacaggagcgggtctgagtggtcgccaggttcataggacgcaggctgtcttcaat
cacacagaagactatgtactgcttccggatgaaagaaccattagcctttgttgctgggac
tcacgaacagctgaaaggaggaaccttctttccttggggcacaacagcatcgttcgctgc
attgtccattctcctaccaatcctggcttcatgacatgcagtgacgactacagagctcga
ttttggtaccgaaggtcaactacggactaa

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