Anolis carolinensis (green anole): 100555540
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Entry
100555540 CDS
T01608
Symbol
lamb4
Name
(RefSeq) laminin subunit beta 4
KO
K06245
laminin, beta 4
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs04510
Focal adhesion
acs04512
ECM-receptor interaction
acs04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100555540 (lamb4)
04518 Integrin signaling
100555540 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
100555540 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
LAMB1
CCDC22_CC
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
100555540
NCBI-ProteinID:
XP_016849674
Ensembl:
ENSACAG00000004580
LinkDB
All DBs
Position
5:complement(97909149..97982136)
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AA seq
1762 aa
AA seq
DB search
MQAVYDDVLMWFMCIVGQDEQKCFTCDSRYPYHPFFQANSHLIENVITDFETDRKKWWQS
ENGVDHVSIRLDLENVFQFSHLILTFKSFRPAAMLVERSADYGQTWKVYRYFAQDCATSF
PGITSKPTKDIGDVICDSRYSDIEPSAEGEVIFKALDPSFEIENPYVPYIQELITFTNLR
INFTKLHTLGDTLLGQKYHNPLEKYYYALYEMVVRGSCFCNGHASSCGPVPNVRGDVFHQ
PGMVHGSCLCEHNTDGLSCERCKDFYNDAPWRPAEGSLENACQKCECNGHSESCHFDMAV
YLSNNGVSGGVCEDCQHNTEGQHCDQCKLFFYRDPQKAISDPQACIPCDCDPEGTMYNGL
CEDHTDPVLGTIAGQCRCKENVEGVRCDKCKPNYYGMSGSDPLGCQSCDCNPSGSLTFSV
CNPVTGECLCQQFATGQHCEECIQGYWGLGSNLYGCSPCDCDIGGAYNNLCASTSGQCEC
LPNIVGRQCTKPASGHFFLPLDYYIYEAEDAAPLPGSSLLASVYKIQPTAMPWCDVYFRQ
KGYDFTMENGNIVLNRSKKRSIRKATAGQSAVLLNRNSALDIVIRESIPGKPMTWSGPGF
VRVQSGTGLRFMINNIPFLMDFNIIIRYEPESLDDWIASIVVKPSAPVGSEHCRSEASLQ
EPHSLALPSTVRIGLLTTPVCLEPGREYFVEVYFSESFTSDSKTRSSILVDSLGLIPRIS
SVENLCDQNDLKEYQHYHCIEIASEIGPHILPEACAMLIASLSARIHNGAVPCRCHPQGS
VDTNCEKLGGQCQCKPNVIGRCCDKCSAGSHSFGPQGCLLCDCHPQGSVSALCDQVTGQC
LCRPEVDGQQCSRCLAGYFGFPHCRPCPCNGFAELCDSQTGACLDCRDFTTGDSCERCID
GYYGNPLKREPCRPCMCPDPPTSRRYFAHSCYQDHWTMQLVCNCFEGYSGNQCDDCLGGF
YGNPKAAGQCLPCSCNNNIDEDDPFSCNKDTGECLKCLHNTHGPNCQYCKPGYFGSALLK
NCKRCDCNLLGTDPAKCVSGEGLCMCDQSTGACSCLPHVIGSKCDQCAPGYWNMTQGIGC
HSCDCNPKHSQNSLCDQVTGQCSCKLGYTGRHCDVCDENSFGDPQIHCISCKCNKEGTLK
PECDKETGACYCRVGVTGQFCDQCARGYDQDFPSCARCHICFDQWDNVVTSLSHKIQTLM
RFAATLGDKANTMPNCDMDLRGHENTISEIERILRSPIMSSEVLSDIKKDHEDIRQKVSQ
MYQQPDFLDHFPDLSGMIEDIRRDADQLSETLKKRSELHHKMNYVHLQDLLKKIRNYYRI
MLSAGERIEGAKSVLTDGAKTQSSILAMMEDLATKGNIALDQLKMFTTSDIENLNEKICG
VSENLPCVVAGCGGALCQDQQGQKHCGGPGCNGALPLSTNAIGNASQVVILLHNLTNQMQ
GFDNKIESIRRMTEDTKKKTLQINGDLEESKNQIEMEGENTKLLIKRLKNFLLEESAPPD
DIETVANYVLGISLPVTPQELTNMLNKFKSLMTQCDDSATYVDELNKHVEEVQNLLEKAQ
KAENVTKALLTPDELIRNLEEMENIQGQTQDDLAKLNGKIEETKTMITEIGNQTKRTDTE
LQNFSEKQSELEDEIISLNTKMQMNEKNITNAGSEAMNQATATNKDFADLKKEYVNLQEK
LKTKGLPLTTLEKMNQLRREAEDLAKETEEKIKRIADLEKKIQDLNQIEQTKAGQLKQLE
DQVIAIKNEITEQSNKYATCKS
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atgcaagctgtttatgatgatgtgttgatgtggtttatgtgcatcgttgggcaagatgaa
cagaaatgtttcacctgtgattctagatatccgtatcacccatttttccaagccaacagt
cacttgattgaaaatgtaatcacagattttgagactgaccgaaagaagtggtggcaatct
gaaaatggtgttgaccatgttagcataaggctggatttggaaaatgtatttcaattcagc
catcttatcctgactttcaagtccttccgtcctgctgctatgctggtggaacggtctgca
gattatggtcagacctggaaggtatatagatattttgcccaagactgtgctacttctttc
cctggcattacttcaaagccaaccaaagacattggagatgttatctgtgattcaaggtat
tctgatattgagccttcagctgaaggagaggttatattcaaagccttggatcctagcttt
gaaatagaaaatccttatgttccgtacatccaagagctcatcacttttacaaacctaaga
atcaactttaccaagctccacacacttggagatactttacttggacaaaaatatcacaat
cctctggaaaagtactactatgcattatacgaaatggttgttcgtgggagttgcttttgc
aatggccatgccagctcctgcggtcctgtgccgaacgtgcggggtgacgtgttccatcaa
cctggaatggtccatgggagctgcctctgcgagcacaacacagatggtttgtcctgtgaa
agatgtaaagatttctacaatgatgctccctggcggccagcagaaggatcactggaaaat
gcctgccaaaagtgtgaatgcaatggtcattctgaaagttgccactttgatatggcagtc
tacctttccaataatggtgtcagtggtggcgtatgcgaagactgtcagcataataccgag
ggacaacactgtgatcagtgcaagcttttcttttatcgggacccacagaaggcaatttca
gaccctcaggcttgtataccctgtgactgcgatccggaagggacaatgtacaatgggcta
tgtgaagatcatacagaccctgtccttgggactattgctggtcagtgccgttgcaaggaa
aatgttgaaggtgttcgttgtgacaagtgcaagccaaactactatggaatgagtggcagt
gatcctcttggctgtcaatcttgcgactgcaacccttctggaagtttgactttctctgtt
tgcaacccagtaactggagagtgtttatgccagcagtttgccactgggcaacattgtgaa
gaatgtattcaaggatactggggccttggaagtaatttatatggatgttctccatgtgac
tgtgacattggtggtgcctacaataacttatgtgcctctactagtggtcaatgtgagtgc
ctacccaacatagtgggtcgccagtgtaccaaaccagcttctggccactttttcttacct
ttggattattacatatatgaagcagaagatgcagcaccacttcctggatcttcactactg
gcatctgtttataagattcaacccacagctatgccatggtgtgatgtctattttcgacaa
aaaggttatgatttcacaatggaaaatggaaacatcgtcttgaacaggagtaagaagaga
agcataaggaaagcaacagctggacagagtgcagtgctgctcaacaggaattctgcactt
gatattgttattagagagtccattcctggaaaaccaatgacatggtcaggtccaggtttt
gtacgtgttcaaagtggaacagggttaagatttatgatcaacaacatccctttcctgatg
gattttaatatcatcattcgctatgagcctgagtctctagacgattggatagcaagcatt
gtcgtaaaaccttctgctcctgtaggaagtgaacactgcaggagtgaggcatccttgcaa
gaaccacactcactggctctcccatctacagtaagaattgggttgctcactactccggta
tgcttagaaccaggaagagaatattttgtagaagtctacttttcagagtcttttacttca
gactcaaagactcggtcgtccatactggttgattcacttggacttattcccagaatcagt
tctgtggaaaacctttgtgaccaaaatgatttaaaagaatatcagcattaccactgcatt
gaaatagcttcagaaattggaccacatatcttaccagaagcatgtgccatgctaatagca
agtctgtctgcccgtattcacaatggtgcagttccctgtaggtgtcatccacaaggttca
gtggacactaactgtgagaaacttggaggccaatgtcaatgcaaaccgaatgtcataggc
cgctgttgcgataaatgctctgctggaagccatagttttgggcctcaaggttgtctctta
tgtgattgtcatcctcaaggatcagtcagtgctctgtgtgaccaggttacagggcagtgt
ttgtgccgaccagaagtagatggccaacaatgcagccgttgcttggctggatactttgga
tttccccattgccggccctgtccttgcaatggctttgcagaactttgtgactcccaaact
ggagcatgcttggattgtagagattttacaactggagacagctgtgaaagatgtattgat
ggttactatggaaatcccctcaaaagggagccctgccgtccatgcatgtgcccagatcct
cccaccagtaggaggtactttgcacactcttgttaccaagatcattggaccatgcaactt
gtctgcaactgttttgagggctactcaggtaatcaatgtgacgactgcctcggtgggttc
tatgggaatccaaaagcagcaggccaatgcctcccatgttcatgcaataataacattgat
gaagatgatccattctcttgtaacaaggacactggagagtgcctaaaatgtttacacaac
acacatggaccaaactgccagtactgcaaacctggttattttggatcagctcttctcaag
aattgtaaaagatgtgactgtaaccttttgggtacagatccagcaaaatgtgtgtctggt
gaaggcctttgcatgtgtgaccagtcaactggagcatgctcttgcttgcctcatgtgata
ggctccaagtgtgaccaatgtgctcctggctactggaacatgacccagggaattgggtgt
cactcctgtgactgcaatccaaagcactcccaaaatagcctctgtgatcaggttacaggt
caatgttcatgtaaactgggctatactggcagacattgtgatgtatgtgatgaaaactct
tttggtgatcctcagatccactgtatttcatgcaagtgtaacaaggagggaaccctgaag
cctgagtgtgataaagaaactggagcgtgctactgccgtgttggggtcactgggcagttc
tgtgaccaatgtgcccggggttatgaccaggactttccatcatgtgcccgctgccacatc
tgctttgatcagtgggataatgtagtgacttccctatctcataaaatccaaaccttgatg
agatttgctgcaacactaggagacaaggcgaacacaatgccaaactgtgatatggacctc
aggggtcacgaaaatacaatttctgagatagaaaggatattaagaagccctatcatgtca
tcagaagtgctctcggacattaaaaaggatcatgaagacattcgacaaaaggtttcacaa
atgtatcagcaacctgattttctggatcactttcctgacctaagcgggatgatagaagac
ataaggagagatgctgatcagctgtctgaaacattgaaaaagagaagtgaattgcatcac
aaaatgaattatgtgcatctccaagatttgctcaagaaaataaggaattattatcgaata
atgttgtctgctggagagagaatcgaaggagcaaagtctgtcttaacagatggagcaaaa
acccagagcagtatacttgcaatgatggaagatttggccacaaaaggaaatattgcgttg
gatcagctgaagatgttcactacttcagatattgagaatctaaatgagaagatatgtgga
gtatcagaaaacttgccctgtgttgtggcaggttgtggaggagccttatgccaagatcag
caggggcaaaaacactgtggtggtccaggctgtaatggagctctccctctttcaacaaat
gccattggaaacgccagtcaagtagtgatattattacataacttgaccaatcagatgcaa
ggatttgacaataagattgaaagtatcagaagaatgactgaggatactaagaagaaaacc
ttacagataaatggagatctggaggaaagtaaaaatcaaatagaaatggaaggagaaaac
actaaattgctcatcaaaagactgaagaattttcttttagaggaaagtgcccctccggac
gacatagagacggtagccaattatgttctgggcatcagcttgccagtgacgcctcaggag
ttaacaaatatgcttaataaattcaagagccttatgacacagtgtgacgactctgcaaca
tatgtggatgagttaaataagcatgtggaagaggtacagaatcttctggaaaaagcacaa
aaagctgagaatgtcacaaaagctcttttaacacctgatgaattgataagaaacttagaa
gaaatggaaaatattcaagggcaaacccaagatgacctcgcaaagttaaatggaaaaata
gaagaaactaaaacaatgatcacagagattgggaaccaaacaaaaaggactgatactgaa
ttacaaaacttttcagaaaaacaatcagagctagaagacgaaattatctctttaaacact
aaaatgcaaatgaatgagaaaaacataacaaatgcaggatcagaagcaatgaatcaggct
acagcaactaataaggattttgctgatcttaaaaaagaatatgtcaatttgcaagaaaaa
ctcaaaacaaaaggccttcctttgacaactttagagaaaatgaaccagttgagaagggag
gcagaggatctggctaaagaaactgaagagaagattaaaagaatagcagatttagaaaag
aagatacaagatctgaaccagattgaacaaacaaaggctggtcagctgaaacaactggaa
gatcaagtcattgctattaaaaatgagatcaccgagcaatcaaacaaatatgcgacttgc
aaaagttaa
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integrated database retrieval system