Anolis carolinensis (green anole): 100555731
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Entry
100555731 CDS
T01608
Symbol
rfc1
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
acs
Anolis carolinensis (green anole)
Pathway
acs03030
DNA replication
acs03410
Base excision repair
acs03420
Nucleotide excision repair
acs03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
acs00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
100555731 (rfc1)
03410 Base excision repair
100555731 (rfc1)
03420 Nucleotide excision repair
100555731 (rfc1)
03430 Mismatch repair
100555731 (rfc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
acs03032
]
100555731 (rfc1)
03400 DNA repair and recombination proteins [BR:
acs03400
]
100555731 (rfc1)
DNA replication proteins [BR:
acs03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
100555731 (rfc1)
DNA repair and recombination proteins [BR:
acs03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
100555731 (rfc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
AAA_22
AAA_14
BRCT_2
AAA_30
AAA_5
RuvB_N
AAA_16
RNA_helicase
AAA_18
Zeta_toxin
nSTAND3
AAA_7
NTPase_1
NPHP3_N
Rad17
AAA_17
AAA_33
AAA_19
Motif
Other DBs
NCBI-GeneID:
100555731
NCBI-ProteinID:
XP_016849372
Ensembl:
ENSACAG00000007579
LinkDB
All DBs
Position
5:73057426..73094817
Genome browser
AA seq
1091 aa
AA seq
DB search
MNKKKRIIYDSDSEEEVQLAKRSKKTPDRKQSSKPDKILKKDPIVYVSETDEDDDFVNKV
TSQKPKQNGTSTGAIETTGTSKTDTKTKIKSKPLSPVKLTPTSAIDYFGTASIQRSEKKL
VSSKRKEVQTSQSRDFTLDDEAIAKQLQLEENTQVERQLHEDEEFARTLAMLDDIPKKKK
PRKDLAEKQAVSTTKMSPDKIPTNKQVNRAKPPISTFDSKPHSTMEQIHLDSTRTSLQPE
SCTSKERKDLGTKILTSKPSSKLSALKQNAESIKRENGTPKEENTSKESMYPKGKIISPK
EEKTPKKVSPQKAKSVSPEDSEKKRANYQAYRSFLNREGPKALGSKVLPQGAENCLEGMT
FVITGVLESIERDEAKSLIERYGGKVTGNISKKTNFLVKGRDCGLSKCEKASALGTKIID
EDGLFDLIQKMPGKKSKYEIAAEAEAKKTKPTRESTPLKGEAVKRKISPKKMESEPEREA
STSADFKSVKKATVDVRRGLDFDEETLEKKHVSKDTGSSVQQTSEGGTEVLLWVDKYRPT
TLKTVIGQQGDQSCANKLLRWLRNWHKNTSGNKHVKSSKFGSKDDGASFKAALLSGPPGV
GKTTTASLVCEELNLSYVELNASDTRNKNSLKEVVAESLNNTSIKGFCSGASSTVSTKHV
LIMDEVDGMAGNEDRGGIQELIDLIKHTKVPIICMCNDRNHPKIRSLVHYCFDLRFYRPR
VEQIKGAMMSIAYKEGLKIPPPAMNEIILAANQDIRQVLHNLSMWSARNKTLTYDGVKED
ASKAKKDIKLGPFDVVRKVFATGEETSRMSLIDKADLFFHDYSLSPLFVQENYIHVQPAA
SGNDMKKHLMLLSKTADSICDGDLVDRQIRSQQNWSLLPTQAIYSSVLPGELMRGYMSQF
PSFPSWLGKFSSTGKHDRLIQELSMHMSLRTHASKRAVNLEYLSYLRDAIVRPLSHLGTE
GVHDAIAVMDSYSLLKEDVESIMEMTSWGGKPSEFSKLDSKVKSAFTRAYNKEAHLTPYS
LQLVQKTKRRASSAVDAEQNEELEADEAQSGNEEETVENDAMIKKKAKTTKQPTAEKKEE
KKKGKAKKKSK
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaaaaagaggatcatctatgattcagattctgaagaggaagtacaattggca
aaaagatctaagaagacaccagacagaaaacaatcttcaaaacctgacaaaattctaaag
aaagatccaattgtatatgtttcagaaacagatgaagatgatgactttgtaaataaggtg
acttcccaaaaacccaagcagaatgggacatctactggtgctattgaaacaacaggaaca
tcaaagacagataccaaaacaaaaataaaaagtaaacctttatctccagtaaaactaaca
ccaacttctgcaattgattattttggaactgccagcatacagcgatcagagaagaaactg
gtatcaagcaaacgaaaagaagtccagacttcacaaagcagggattttacactggatgat
gaagctattgccaagcaactacagcttgaagagaatacacaggtggaaagacaactgcac
gaagatgaagaatttgctagaactctagcaatgttggatgacatcccaaagaagaaaaag
cctcgaaaggatctggcagagaaacaggcagtgtcaacaaccaaaatgagtccagataaa
ataccaaccaataaacaagttaatagagcaaaacctcccatttcaacttttgactcaaaa
cctcattctacaatggagcagattcatttggatagtactagaacaagtcttcagccagaa
tcctgtactagtaaagagaggaaggatttggggaccaagatattgacctcgaaacctagc
tccaagttatcagcacttaagcaaaatgcagagagtattaaaagagaaaatgggactcca
aaagaagaaaatactagtaaagaaagtatgtatccaaaaggaaagataatttcgccaaaa
gaggagaaaacacctaaaaaggtttctccccaaaaagctaagtctgttagccctgaagac
tctgaaaagaaacgagctaactatcaggcctatagaagcttcttgaatcgagaaggtcca
aaagcacttggttccaaagtgctgccacaaggtgcagaaaattgcctggaaggtatgaca
tttgtgatcacaggtgtcttggaatccattgaacgtgatgaagccaaatctctaatcgag
cgttatggagggaaagtcactggtaacatcagcaagaagacaaactttcttgttaaaggc
cgtgactgtggattgtctaagtgtgagaaggcttcagctttagggacgaaaataattgat
gaagacggtttatttgatttgattcagaagatgccaggcaagaaatcaaagtatgaaata
gcagctgaagcagaggcaaagaaaacaaaacccaccagagagagcaccccgctgaaaggt
gaggcagttaaaagaaaaattagcccaaagaaaatggaaagtgaaccagaaagggaggcc
tccacctctgcagacttcaaatccgtcaagaaagcaactgtggatgtgaggaggggcttg
gactttgatgaggaaaccttagaaaaaaagcatgtttcaaaagatactggaagctcagtt
cagcaaacaagtgaaggtggcacagaagtattactttgggtggacaaatacagacctaca
acccttaaaacagtcattggacaacagggagaccagagttgtgccaataaacttttacgt
tggcttcgaaactggcacaagaatacttcaggaaataaacacgtaaaatccagtaagttt
ggaagcaaagatgatggggctagtttcaaagcagctttactctcaggcccccctggggtt
ggtaaaactactacagcttctttagtttgtgaggaactcaacttgagctatgtggagtta
aatgcaagtgatacacgcaataagaacagcctgaaggaagtggttgctgaatccctaaat
aacaccagcattaaaggtttttgttcaggagcatcatctacagtcagtacaaaacacgtc
ctaatcatggatgaagtggatggaatggctggcaatgaagacagaggagggatacaggag
ctgattgacctgattaaacacaccaaggttcctattatttgtatgtgtaatgatcggaat
catcccaagatccgttcccttgtccactactgttttgaccttcgcttttacagaccacgt
gtagaacagattaagggtgcaatgatgtctattgcctacaaagaaggactaaagattcca
ccgccagcgatgaatgaaataatcttagcagctaatcaagatattagacaagtacttcac
aatctcagcatgtggtctgcaagaaacaaaaccctgacttatgatggtgttaaagaggat
gccagcaaagctaaaaaggatatcaaactgggcccttttgatgttgtcaggaaggttttt
gctactggagaggagacttctcgcatgtcccttattgacaaagcagacttgttcttccat
gactactctctaagcccactttttgtccaggagaactatatccatgtacagccagcagct
tctgggaatgatatgaaaaaacatttgatgttgcttagcaaaacagctgatagtatatgt
gatggtgacttagttgaccgacagattcgcagtcaacaaaattggagccttttacccaca
caggccatttattcaagtgtcctccctggggagctaatgagaggctacatgagccaattc
ccaagcttcccaagctggttgggaaaattttcatcaacaggaaaacatgaccgtctcatt
caagagttgtcaatgcacatgagcctcaggacgcatgcaagcaagagagctgtaaatctt
gaatatttgtcatacctacgggatgcaattgtgagacctttgtcgcacctgggaacagaa
ggagtgcatgatgctatagcagtgatggattcttactccttgttgaaggaagatgttgaa
agcatcatggaaatgaccagctggggaggaaagccaagtgaattctctaaactcgattcc
aaggttaaatctgctttcacacgagcctataacaaagaggcacatcttacaccatattca
ctgcaactcgtacagaagacaaagcgacgagcaagttctgcagtggatgcagaacaaaat
gaagaactggaagctgatgaagcccagtctggaaatgaagaagagacggttgaaaatgat
gccatgattaagaagaaagccaagactaccaagcaaccaacagcagaaaaaaaagaagaa
aagaaaaaggggaaagcaaagaaaaagtccaaatga
DBGET
integrated database retrieval system
